Factsheet for AT5G56660.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

endoplasmic reticulum 7
golgi 5
extracellular 5
vacuole 5
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G56650.1	Thale cress	endoplasmic reticulum	87.93	88.13
CDY11910	Canola	endoplasmic reticulum	77.22	79.39
Bra006863.1-P	Field mustard	endoplasmic reticulum	78.59	78.59
CDX88581	Canola	endoplasmic reticulum	78.36	78.36
Bra002800.1-P	Field mustard	endoplasmic reticulum	79.04	78.15
CDY32768	Canola	endoplasmic reticulum	78.82	77.93
CDY32874	Canola	endoplasmic reticulum	78.13	76.56
CDY42210	Canola	mitochondrion	26.65	68.42
GSMUA_Achr7P24240_001	Banana	endoplasmic reticulum	42.14	62.29
GSMUA_Achr4P15750_001	Banana	endoplasmic reticulum	59.91	60.05
AT1G51760.1	Thale cress	endoplasmic reticulum	59.0	58.86
AT1G51780.1	Thale cress	endoplasmic reticulum	58.09	58.62
HORVU3Hr1G048560.1	Barley	endoplasmic reticulum	56.04	55.78
TraesCS3A01G204400.1	Wheat	endoplasmic reticulum	54.9	55.66
Os01t0560000-01	Rice	plasma membrane	55.58	55.2
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	54.67	55.17
TraesCS3D01G207700.2	Wheat	endoplasmic reticulum	55.13	54.88
Zm00001d044225_P001	Maize	extracellular	56.04	54.67
OQU87019	Sorghum	endoplasmic reticulum	56.49	50.41
AT3G02875.1	Thale cress	endoplasmic reticulum	45.33	45.02
AT5G54140.1	Thale cress	endoplasmic reticulum	43.74	44.86
AT1G44350.1	Thale cress	endoplasmic reticulum	47.15	44.61

Protein Annotations

MapMan:19.4.5.6.6	PDB:1XMB	PDB:2Q43	Gene3D:3.30.70.360	Gene3D:3.40.630.10	EntrezGene:835767
ProteinID:AAC04866.1	ProteinID:AED96793.1	ArrayExpress:AT5G56660	EnsemblPlantsGene:AT5G56660	RefSeq:AT5G56660	TAIR:AT5G56660
RefSeq:AT5G56660-TAIR-G	EnsemblPlants:AT5G56660.1	TAIR:AT5G56660.1	EMBL:AY072084	InterPro:Amidohydrolase	Unigene:At.66661
ProteinID:BAB09884.1	EMBL:BT020494	InterPro:Bact_exopeptidase_dim_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005788
GO:GO:0008150	GO:GO:0008152	GO:GO:0009850	GO:GO:0009987	GO:GO:0010178	GO:GO:0010179
GO:GO:0016787	GO:GO:0046872	Symbol:ILL2	MEROPS:M20.014	RefSeq:NP_200477.1	UniProt:P54970
PFAM:PF01546	PFAM:PF07687	PIRSF:PIRSF005962	PO:PO:0000293	PANTHER:PTHR11014	PANTHER:PTHR11014:SF119
InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	UniProt:Q5HZ30	SUPFAM:SSF53187	SUPFAM:SSF55031	SignalP:SignalP-noTM
TIGRFAMs:TIGR01891	EMBL:U23796	UniParc:UPI0000048C85	SEG:seg	:	:

Description

ILL2At5g56660 [Source:UniProtKB/TrEMBL;Acc:Q5HZ30]

Coordinates

chr5:+:22933267..22935316

Molecular Weight (calculated)

47858.7 Da

IEP (calculated)

6.880

GRAVY (calculated)

-0.059

Length

439 amino acids

Sequence
(BLAST)

001: MALNKLLSLT FQLLLFLLSV SSESPWIAED TSQIQTKLLE FAKSPEVFDW MVKIRRKIHE NPELGYEELE TSKLIRSELE LIGIKYRYPV AITGVIGYIG
101: TGEPPFVALR ADMDALPIQE GVEWEHKSKI AGKMHACGHD GHVTMLLGAA KILHEHRHHL QGTVVLIFQP AEEGLSGAKK MREEGALKNV EAIFGIHLSA
201: RIPFGKAASR AGSFLAGAGV FEAVITGKGG HAAIPQHTID PVVAASSIVL SLQQLVSRET DPLDSKVVTV SKVNGGNAFN VIPDSITIGG TLRAFTGFTQ
301: LQQRVKEVIT KQAAVHRCNA SVNLTPNGRE PMPPTVNNKD LYKQFKKVVR DLLGQEAFVE AAPVMGSEDF SYFAETIPGH FSLLGMQDET NGYASSHSPL
401: YRINEDVLPY GAAIHASMAV QYLKEKASKG SVSGFHEEL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.