CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

plastid 3
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22869	Canola	endoplasmic reticulum	98.04	79.41
CDY43926	Canola	endoplasmic reticulum	95.25	76.8
CDX87841	Canola	endoplasmic reticulum	94.97	76.58
AT1G51760.1	Thale cress	endoplasmic reticulum	89.39	72.73
GSMUA_Achr7P24240_001	Banana	endoplasmic reticulum	55.87	67.34
AT1G51780.1	Thale cress	endoplasmic reticulum	81.56	67.13
VIT_09s0002g02630.t01	Wine grape	endoplasmic reticulum	73.18	59.41
KRH23345	Soybean	endoplasmic reticulum	71.51	57.66
PGSC0003DMT400006691	Potato	endoplasmic reticulum	71.23	57.3
KRH09985	Soybean	endoplasmic reticulum	70.95	57.21
Solyc03g121270.2.1	Tomato	endoplasmic reticulum, plastid	70.95	57.08
KRH44216	Soybean	extracellular	65.92	54.76
GSMUA_Achr4P15750_001	Banana	endoplasmic reticulum	66.76	54.57
KRH44217	Soybean	endoplasmic reticulum, golgi	66.48	53.72
KRH47175	Soybean	endoplasmic reticulum	66.2	53.62
TraesCS3A01G204400.1	Wheat	endoplasmic reticulum	64.8	53.58
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	64.8	53.33
CDX88581	Canola	endoplasmic reticulum	65.08	53.08
TraesCS3D01G207700.2	Wheat	endoplasmic reticulum	65.36	53.06
CDY11910	Canola	endoplasmic reticulum	62.57	52.46
Zm00001d044225_P001	Maize	extracellular	65.92	52.44
HORVU3Hr1G048560.1	Barley	endoplasmic reticulum	64.53	52.38
CDY32768	Canola	endoplasmic reticulum	64.8	52.25
KRH47174	Soybean	endoplasmic reticulum, golgi, vacuole	64.25	52.15
Os01t0560000-01	Rice	plasma membrane	64.25	52.04
CDY32874	Canola	endoplasmic reticulum	63.97	51.12
KRH44221	Soybean	endoplasmic reticulum, extracellular	28.21	51.01
KRH44214	Soybean	endoplasmic reticulum	66.2	50.86
OQU87019	Sorghum	endoplasmic reticulum	65.36	47.56
KRH44218	Soybean	golgi	63.13	42.4
KRH44220	Soybean	cytosol	30.73	40.74
CDY12538	Canola	cytosol, endoplasmic reticulum	32.12	39.25
CDY14979	Canola	endoplasmic reticulum	49.16	38.18
CDY28718	Canola	endoplasmic reticulum	46.37	38.07
CDY51525	Canola	endoplasmic reticulum	46.37	37.73
CDY14333	Canola	endoplasmic reticulum	44.69	37.47
CDY60579	Canola	endoplasmic reticulum	44.69	37.3
KRH47173	Soybean	cytosol, plastid	17.32	33.7
CDY42210	Canola	mitochondrion	10.61	22.22
CDY09109	Canola	cytoskeleton, cytosol, vacuole	0.0	0.0
CDX90411	Canola	cytoskeleton, cytosol, vacuole	0.0	0.0

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	GO:A0A078JWC4	UniProt:A0A078JWC4	InterPro:Amidohydrolase
InterPro:Bact_exopeptidase_dim_dom	EnsemblPlants:CDY69786	ProteinID:CDY69786	ProteinID:CDY69786.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00092471001	PFAM:PF01546	PFAM:PF07687
PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF55	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187
SUPFAM:SSF55031	SignalP:SignalP-noTM	TIGRFAMs:TIGR01891	UniParc:UPI0004EF056D	SEG:seg	:

Description

BnaC06g41050DBnaC06g41050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWC4]

Coordinates

chrLK040322:-:3..2101

Molecular Weight (calculated)

38795.0 Da

IEP (calculated)

7.007

GRAVY (calculated)

0.047

Length

358 amino acids

Sequence
(BLAST)

001: MSLCKWVSFL LIIHLLNSSQ ISSSSSLTSN GFSQIPSKFL ALAKRSDFYD WMVGIRRRIH ENPELGYEEV ETSKLVRTEL EKMGVSYKYP VAVTGVVGYV
101: GTGQAPFVAL RADMDALPMQ EMVEWEHKSK VPGKMHACGH DAHTTMLLGA AKLLIEHQDE LQGTVILVFQ PAEEGGGGAK KIVEAGVLKD VSAIFGLHVT
201: NQLGLGLVSS REGPLLAGSG FFEAKISGKG GHAALPQHAI DPILAASNII VTLQHLVSRE ADPLDSQVVT VAKFEGGGAF NVIPDSVTIG GTFRAFSTKS
301: FTQLKKRIEQ VITRQASVHM CNATVDFLQE EKPFFPPTVN DKALHMFFKN VSGDMLGT

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.