CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 6
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

extracellular: 25724908

msms PMID: 25724908 doi

VC Clarke, PC Loughlin, A Gavrin, C Chen, EM Brear, DA Day, PM Smith

From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47175	Soybean	endoplasmic reticulum	82.37	80.32
KRH47174	Soybean	endoplasmic reticulum, golgi, vacuole	80.28	78.46
KRH44217	Soybean	endoplasmic reticulum, golgi	80.05	77.88
KRH09985	Soybean	endoplasmic reticulum	75.41	73.2
KRH23345	Soybean	endoplasmic reticulum	75.17	72.97
KRH44214	Soybean	endoplasmic reticulum	76.57	70.82
VIT_09s0002g02630.t01	Wine grape	endoplasmic reticulum	69.61	68.03
CDY69786	Canola	endoplasmic reticulum, extracellular	54.76	65.92
PGSC0003DMT400006691	Potato	endoplasmic reticulum	67.98	65.84
Solyc03g121270.2.1	Tomato	endoplasmic reticulum, plastid	67.75	65.62
KRH44220	Soybean	cytosol	40.84	65.19
GSMUA_Achr7P24240_001	Banana	endoplasmic reticulum	44.55	64.65
KRH44221	Soybean	endoplasmic reticulum, extracellular	29.7	64.65
AT1G51760.1	Thale cress	endoplasmic reticulum	65.43	64.09
KRH44218	Soybean	golgi	79.12	63.98
GSMUA_Achr4P15750_001	Banana	endoplasmic reticulum	64.5	63.47
CDY43926	Canola	endoplasmic reticulum	64.73	62.84
Bra030419.1-P	Field mustard	endoplasmic reticulum	64.73	62.84
CDX87841	Canola	endoplasmic reticulum	64.5	62.61
AT1G51780.1	Thale cress	endoplasmic reticulum	63.11	62.53
CDY22869	Canola	endoplasmic reticulum	63.81	62.22
Bra018932.1-P	Field mustard	endoplasmic reticulum	63.57	61.99
Os01t0560000-01	Rice	plasma membrane	61.02	59.5
TraesCS3A01G204400.1	Wheat	endoplasmic reticulum	59.16	58.89
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	58.47	57.93
HORVU3Hr1G048560.1	Barley	endoplasmic reticulum	59.16	57.82
TraesCS3D01G207700.2	Wheat	endoplasmic reticulum	59.16	57.82
Zm00001d044225_P001	Maize	extracellular	60.09	57.56
KRH47173	Soybean	cytosol, plastid	22.97	53.8
OQU87019	Sorghum	endoplasmic reticulum	60.79	53.25
KRH45754	Soybean	endoplasmic reticulum	51.04	49.66
KRG99236	Soybean	endoplasmic reticulum	50.12	48.98
KRH53263	Soybean	endoplasmic reticulum	52.2	48.39
KRH64641	Soybean	endoplasmic reticulum	51.04	47.21
KRH64274	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	47.33	43.5

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	UniProt:A0A0R4J3Y3	EMBL:ACUP02004911	InterPro:Amidohydrolase
InterPro:Bact_exopeptidase_dim_dom	EnsemblPlantsGene:GLYMA_08G196900	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	EnsemblPlants:KRH44216	ProteinID:KRH44216	ProteinID:KRH44216.1	PFAM:PF01546	PFAM:PF07687
PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF55	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187
SUPFAM:SSF55031	SignalP:SignalP-TM	TIGRFAMs:TIGR01891	TMHMM:TMhelix	UniParc:UPI0001B63B53	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:15888862..15895281

Molecular Weight (calculated)

47024.7 Da

IEP (calculated)

6.709

GRAVY (calculated)

0.010

Length

431 amino acids

Sequence
(BLAST)

001: MSSFKTWFNL FTIFYVLAAT PIFSLTDSSN QLSTNFLEIA KKPEVFDWMV KIRRKIHENP ELGYEEFETS KLIREELDKL GIPYKYPVAV TGVIGFIGTG
101: KSPFVALRAD MDALPVQEMV EWEHKSKVPG KMHACGHDAH VTMLLGAANI LKQHEKEIQG TVVLVFQPAE EGGGGAKKIL DAGALENVTA IFGLHVVPLI
201: PVGTAASRSG PLTAGSGFFE AKISGKGGHA AIPQLSIDPI LAASNVIISL QHLVSREADP LDPRVVTVSK IQGGDAFNVI PDYATIGGTY RGFTNKSMDQ
301: LKLRIKQVII GQAAVQRCNA TVNFFENVGP ANPPTVNNGD LHKHFQNVAE NVLGVNNVNL NMPPFMVAED FAFYQEVIPG YFFTLGMKYA SPNEPFQSLH
401: SPYLRINEDG LPYGAALHAS LATSYLIKLQ Q

Best Arabidopsis Sequence Match ( AT5G56660.1 )
(BLAST)

001: MALNKLLSLT FQLLLFLLSV SSESPWIAED TSQIQTKLLE FAKSPEVFDW MVKIRRKIHE NPELGYEELE TSKLIRSELE LIGIKYRYPV AITGVIGYIG
101: TGEPPFVALR ADMDALPIQE GVEWEHKSKI AGKMHACGHD GHVTMLLGAA KILHEHRHHL QGTVVLIFQP AEEGLSGAKK MREEGALKNV EAIFGIHLSA
201: RIPFGKAASR AGSFLAGAGV FEAVITGKGG HAAIPQHTID PVVAASSIVL SLQQLVSRET DPLDSKVVTV SKVNGGNAFN VIPDSITIGG TLRAFTGFTQ
301: LQQRVKEVIT KQAAVHRCNA SVNLTPNGRE PMPPTVNNKD LYKQFKKVVR DLLGQEAFVE AAPVMGSEDF SYFAETIPGH FSLLGMQDET NGYASSHSPL
401: YRINEDVLPY GAAIHASMAV QYLKEKASKG SVSGFHEEL

Arabidopsis Description

ILL2At5g56660 [Source:UniProtKB/TrEMBL;Acc:Q5HZ30]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.