Factsheet for Solyc03g121270.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:

cytosol 1
plastid 1
extracellular 4
endoplasmic reticulum 8
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

plastid: 26371478

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400006691	Potato	endoplasmic reticulum	95.73	95.73
VIT_09s0002g02630.t01	Wine grape	endoplasmic reticulum	73.26	73.92
KRH23345	Soybean	endoplasmic reticulum	72.13	72.3
KRH09985	Soybean	endoplasmic reticulum	71.46	71.62
CDY69786	Canola	endoplasmic reticulum, extracellular	57.08	70.95
GSMUA_Achr7P24240_001	Banana	endoplasmic reticulum	46.52	69.7
KRH44216	Soybean	extracellular	65.62	67.75
KRH47175	Soybean	endoplasmic reticulum	67.19	67.65
GSMUA_Achr4P15750_001	Banana	endoplasmic reticulum	66.52	67.58
AT1G51760.1	Thale cress	endoplasmic reticulum	66.74	67.5
Solyc12g008690.1.1	Tomato	endoplasmic reticulum	67.64	67.49
CDY22869	Canola	endoplasmic reticulum	66.52	66.97
Bra018932.1-P	Field mustard	endoplasmic reticulum	66.52	66.97
KRH44214	Soybean	endoplasmic reticulum	70.11	66.95
CDY43926	Canola	endoplasmic reticulum	66.07	66.22
CDX87841	Canola	endoplasmic reticulum	66.07	66.22
Bra030419.1-P	Field mustard	endoplasmic reticulum	66.07	66.22
KRH44217	Soybean	endoplasmic reticulum, golgi	65.84	66.14
Os01t0560000-01	Rice	plasma membrane	65.62	66.06
KRH47174	Soybean	endoplasmic reticulum, golgi, vacuole	65.17	65.76
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	64.27	65.75
TraesCS3A01G204400.1	Wheat	endoplasmic reticulum	63.6	65.36
TraesCS3D01G207700.2	Wheat	endoplasmic reticulum	64.49	65.08
HORVU3Hr1G048560.1	Barley	endoplasmic reticulum	63.82	64.4
Zm00001d044225_P001	Maize	extracellular	64.72	64.0
AT1G51780.1	Thale cress	endoplasmic reticulum	61.12	62.53
KRH44220	Soybean	cytosol	35.73	58.89
OQU87019	Sorghum	endoplasmic reticulum	64.94	58.74
KRH44218	Soybean	golgi	63.15	52.72
Solyc05g006220.2.1	Tomato	endoplasmic reticulum	52.58	52.7
KRH44221	Soybean	endoplasmic reticulum, extracellular	22.7	51.01
KRH47173	Soybean	cytosol, plastid	20.9	50.54
Solyc06g073060.2.1	Tomato	endoplasmic reticulum	48.54	50.23
Solyc06g054410.2.1	Tomato	endoplasmic reticulum	46.97	48.16
Solyc10g079640.1.1	Tomato	endoplasmic reticulum	51.01	46.8

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	UniProt:K4BMS6	PFAM:PF01546
PFAM:PF07687	PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF55	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer
SUPFAM:SSF53187	SUPFAM:SSF55031	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc03g121270.2	EnsemblPlants:Solyc03g121270.2.1	TIGRFAMs:TIGR01891
TMHMM:TMhelix	UniParc:UPI0002767140	:	:	:	:

Description

No Description!

Coordinates

chr3:+:69429833..69434237

Molecular Weight (calculated)

48756.5 Da

IEP (calculated)

5.155

GRAVY (calculated)

-0.040

Length

445 amino acids

Sequence
(BLAST)

001: MDISRWVFLI LIFVSFATIP IFSDSQLSSG ELPDIPVKFL DFAKKSEVFD WMVEVRRRIH ENPELGYEEL ETSKLIREEL DNMGIQYKYP FANTGIVGFI
101: GSGDPPFVGI RADMDALPMQ EMVDWEHKSR NPGKMHACGH DAHIAMLLGA AKILLQHQNI LKGTVALVFQ PAEEGGGGAK KMIEAGALEN VEAIFGLHVH
201: PNFPLGKVSS RPGPFLAGSG FFEAVISGRG GHAAIPQHSI DPILAASNVI VSLQHLVSRE ADPLDSQVVT VAKFQGGGAF NVIPDSVTIG GTFRAFSKES
301: FLQLRQRIEE VIVGQAAVQR CNATVDFLTN SKPFFPPTVN DKNLHKHFQR VAGDMLGNDH VKDMEPLMGS EDFAFYQEVI PGYFYMLGMQ GETNENPASV
401: HSPYFKINEE ALPLGAALQA SLAITYLLEA QPQVPSSSIN GHDEL

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.