Factsheet for PGSC0003DMT400040310

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g006220.2.1	Tomato	endoplasmic reticulum	95.27	95.27
KRG99236	Soybean	endoplasmic reticulum	64.86	65.31
KRH45754	Soybean	endoplasmic reticulum	64.86	65.01
PGSC0003DMT400076719	Potato	cytosol	44.82	56.86
GSMUA_Achr9P14470_001	Banana	endoplasmic reticulum, vacuole	58.56	56.4
PGSC0003DMT400006691	Potato	endoplasmic reticulum	52.25	52.13
PGSC0003DMT400000925	Potato	endoplasmic reticulum	52.03	51.79
PGSC0003DMT400069509	Potato	endoplasmic reticulum	47.75	49.3
PGSC0003DMT400081932	Potato	endoplasmic reticulum	31.08	48.42
PGSC0003DMT400079045	Potato	endoplasmic reticulum	44.59	45.21
PGSC0003DMT400081926	Potato	endoplasmic reticulum	24.1	44.03
PGSC0003DMT400010807	Potato	endoplasmic reticulum, extracellular	21.17	38.21
VIT_01s0026g00820.t01	Wine grape	endoplasmic reticulum	68.47	33.22

Protein Annotations

EntrezGene:102601526	MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	UniProt:M1B9Q1
PFAM:PF01546	PFAM:PF07687	EnsemblPlantsGene:PGSC0003DMG400015607	PGSC:PGSC0003DMG400015607	EnsemblPlants:PGSC0003DMT400040310	PIRSF:PIRSF005962
PANTHER:PTHR11014	PANTHER:PTHR11014:SF139	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187	SUPFAM:SSF55031
SignalP:SignalP-noTM	TIGRFAMs:TIGR01891	UniParc:UPI0002955E37	RefSeq:XP_006355931.1	SEG:seg	:

Description

Iaa-amino acid hydrolase 10 [Source:PGSC_GENE;Acc:PGSC0003DMG400015607]

Coordinates

chr5:+:7093667..7098815

Molecular Weight (calculated)

49173.2 Da

IEP (calculated)

6.872

GRAVY (calculated)

-0.114

Length

444 amino acids

Sequence
(BLAST)

001: MGTKKVLVLL VFSMFMFFSL GHEEECLNPF LIDQNIFAKD HIINLANDTE TVKWMRKIRR QIHENPELAY EEFMTSALIR EELDRMGVKY RWPVAKTGVV
101: AAIGSGKPPF VALRADMDAL PIQELSKWEH KSKIDGKMHA CAHDAHTTML LGAAKILQQL QHNLQGTVVL IFQPAEERGH GAKDMIDEGV LENVEAIFGM
201: HLVHKYSSGV VASRPGEFLA GCGSFKATIR GKGGHAAIPQ DTVDPILAAS TSVISLQSIV SREADPLESQ VVSVAMIQGG SSFNVIPDSA TISGTYRAFS
301: KKSFYGLRKR IEEIVRAQAA VHRCTVEIDF DGRENPTLPP TINNEKIYEH ARKVSKMIVG EENYKLSPSF MGSEDFAVFL EKVPGSLFLL GTKNEKIGAI
401: YPPHNPNFFI DEDVLPIGAA IHATFAYTYL FNSTNKCTNS HSSY

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.