Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G60210.1 | KRG89335 | AT1G23100.1 | 21798944 |
| AT3G60210.1 | KRH50384 | AT1G23100.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48902 | Soybean | plastid | 97.01 | 97.01 |
| PGSC0003DMT400004324 | Potato | plastid | 68.66 | 68.15 |
| CDY48244 | Canola | cytosol, plastid | 53.73 | 67.29 |
| Solyc01g088610.2.1 | Tomato | plastid | 66.42 | 65.93 |
| AT3G60210.1 | Thale cress | plastid | 61.19 | 59.42 |
| AT2G44650.1 | Thale cress | plastid | 61.19 | 58.99 |
| Bra037640.1-P | Field mustard | plastid | 60.45 | 58.27 |
| CDY23449 | Canola | plastid | 60.45 | 58.27 |
| CDY30480 | Canola | plastid | 60.45 | 58.27 |
| GSMUA_Achr11P... | Banana | plastid | 61.19 | 57.34 |
| TraesCS1A01G214600.1 | Wheat | plastid | 58.96 | 57.25 |
| Os10t0566700-00 | Rice | plastid | 58.96 | 56.43 |
| HORVU1Hr1G054630.2 | Barley | plastid | 57.46 | 56.2 |
| Bra004853.1-P | Field mustard | plastid | 58.21 | 56.12 |
| GSMUA_Achr2P18220_001 | Banana | plastid | 58.21 | 55.71 |
| TraesCS1B01G228500.1 | Wheat | plastid | 57.46 | 55.4 |
| Zm00001d029997_P002 | Maize | plastid | 55.22 | 55.22 |
| TraesCS1D01G217600.1 | Wheat | plastid | 57.46 | 55.0 |
| EER94466 | Sorghum | plastid | 54.48 | 54.48 |
| Zm00001d002408_P002 | Maize | plastid | 54.48 | 54.48 |
| Zm00001d047067_P001 | Maize | plastid | 54.48 | 53.28 |
| VIT_15s0021g00830.t01 | Wine grape | plastid | 58.21 | 51.32 |
| HORVU6Hr1G016500.1 | Barley | plastid | 39.55 | 48.62 |
| HORVU3Hr1G111860.1 | Barley | plastid | 29.85 | 37.04 |
Protein Annotations
| MapMan:1.2.1.2.3 | EntrezGene:100306026 | MapMan:19.1.7.3 | Gene3D:2.30.33.40 | EMBL:ACUP02001954 | EMBL:BT089927 |
| UniProt:C6SXN0 | InterPro:Chaperonin_GroES | InterPro:Chaperonin_GroES_sf | EnsemblPlantsGene:GLYMA_03G103600 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005759 | GO:GO:0006457 | GO:GO:0006950 | GO:GO:0006986 | GO:GO:0008150 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0046872 | GO:GO:0051082 | GO:GO:0051085 | GO:GO:0051087 |
| InterPro:GroES-like_sf | InterPro:IPR037124 | EnsemblPlants:KRH66392 | ProteinID:KRH66392 | ProteinID:KRH66392.1 | PFAM:PF00166 |
| PANTHER:PTHR10772 | PANTHER:PTHR10772:SF13 | SMART:SM00883 | SUPFAM:SSF50129 | UniParc:UPI0001AE61A5 | : |
Description
hypothetical protein
Coordinates
chr3:-:29762718..29766420
Molecular Weight (calculated)
14750.0 Da
IEP (calculated)
9.198
GRAVY (calculated)
0.029
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTFLTLPT PFLHKTNAIS FSNKRPSFLQ RSSLKIHAIT KKWEPTKVVP QADRVLIRLE ELSDKTVGGV LLPKSAVKFE RYLVGEILTV GAEAGELKAG
101: TKVLFTDMNA YEVDLGTDAK HCFCKASDLL AVVE
101: TKVLFTDMNA YEVDLGTDAK HCFCKASDLL AVVE
001: MASSFITVPK PFLSFPIKTN APTLPQQTLL GIRRNSFRIN AVSTKWEPAK VVPQADRVLV RLEVLPEKSS GGVLLPKSAV KFERYLTGEV VSVGSEVGEV
101: EPGKKVLFSD MSAYEVDFGT EDAKHCFCKE SDLLAIVQ
101: EPGKKVLFSD MSAYEVDFGT EDAKHCFCKE SDLLAIVQ
Arabidopsis Description
CPN10-110 kDa chaperonin 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1C2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.