Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G214600.1 | Wheat | plastid | 93.57 | 94.93 |
| HORVU1Hr1G054630.2 | Barley | plastid | 92.86 | 94.89 |
| TraesCS1B01G228500.1 | Wheat | plastid | 92.86 | 93.53 |
| HORVU6Hr1G016500.1 | Barley | plastid | 68.57 | 88.07 |
| Os10t0566700-00 | Rice | plastid | 84.29 | 84.29 |
| EER94466 | Sorghum | plastid | 70.71 | 73.88 |
| Zm00001d047067_P001 | Maize | plastid | 70.71 | 72.26 |
| Zm00001d029997_P002 | Maize | plastid | 68.57 | 71.64 |
| Zm00001d002408_P002 | Maize | plastid | 67.86 | 70.9 |
| GSMUA_Achr11P... | Banana | plastid | 66.43 | 65.03 |
| GSMUA_Achr2P18220_001 | Banana | plastid | 62.86 | 62.86 |
| PGSC0003DMT400004324 | Potato | plastid | 58.57 | 60.74 |
| Solyc01g088610.2.1 | Tomato | plastid | 58.57 | 60.74 |
| CDY48244 | Canola | cytosol, plastid | 45.71 | 59.81 |
| AT3G60210.1 | Thale cress | plastid | 57.86 | 58.7 |
| KRH48902 | Soybean | plastid | 55.0 | 57.46 |
| KRH66392 | Soybean | plastid | 55.0 | 57.46 |
| CDY23449 | Canola | plastid | 51.43 | 51.8 |
| CDY30480 | Canola | plastid | 50.71 | 51.08 |
| Bra037640.1-P | Field mustard | plastid | 50.71 | 51.08 |
| AT2G44650.1 | Thale cress | plastid | 50.71 | 51.08 |
| Bra004853.1-P | Field mustard | plastid | 49.29 | 49.64 |
| VIT_15s0021g00830.t01 | Wine grape | plastid | 50.0 | 46.05 |
Protein Annotations
| MapMan:1.2.1.2.3 | MapMan:19.1.7.3 | Gene3D:2.30.33.40 | InterPro:Chaperonin_GroES | InterPro:Chaperonin_GroES_sf | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:GroES-like_sf | InterPro:IPR037124 | PFAM:PF00166 | PRINTS:PR00297 | PANTHER:PTHR10772 | PANTHER:PTHR10772:SF13 |
| SMART:SM00883 | SUPFAM:SSF50129 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS1D01G217600 | EnsemblPlants:TraesCS1D01G217600.1 | TIGR:cd00320 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:302886760..302889398
Molecular Weight (calculated)
14664.7 Da
IEP (calculated)
7.348
GRAVY (calculated)
0.179
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSLLAAAA SPFLLHAAAG SASPRPVSAA AATGRRAASS VRVRAAIKCD PSKVEPQSDR VLVRLETIPE KSAGGVLLPK SAVKFERYLM GEILSVGVDV
101: SEVEAGKKVL FSDINAYEVD LGTEEKHCFC RESDLLAVVA
101: SEVEAGKKVL FSDINAYEVD LGTEEKHCFC RESDLLAVVA
001: MASSFITVPK PFLSFPIKTN APTLPQQTLL GIRRNSFRIN AVSTKWEPAK VVPQADRVLV RLEVLPEKSS GGVLLPKSAV KFERYLTGEV VSVGSEVGEV
101: EPGKKVLFSD MSAYEVDFGT EDAKHCFCKE SDLLAIVQ
101: EPGKKVLFSD MSAYEVDFGT EDAKHCFCKE SDLLAIVQ
Arabidopsis Description
CPN10-110 kDa chaperonin 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1C2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.