Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30480 | Canola | plastid | 95.68 | 95.68 |
| Bra004853.1-P | Field mustard | plastid | 92.81 | 92.81 |
| CDY48244 | Canola | cytosol, plastid | 70.5 | 91.59 |
| AT2G44650.1 | Thale cress | plastid | 82.73 | 82.73 |
| Solyc01g088610.2.1 | Tomato | plastid | 66.19 | 68.15 |
| PGSC0003DMT400004324 | Potato | plastid | 65.47 | 67.41 |
| KRH66392 | Soybean | plastid | 58.27 | 60.45 |
| KRH48902 | Soybean | plastid | 58.27 | 60.45 |
| GSMUA_Achr2P18220_001 | Banana | plastid | 58.99 | 58.57 |
| Zm00001d029997_P002 | Maize | plastid | 54.68 | 56.72 |
| EER94466 | Sorghum | plastid | 53.96 | 55.97 |
| Zm00001d002408_P002 | Maize | plastid | 53.96 | 55.97 |
| GSMUA_Achr11P... | Banana | plastid | 57.55 | 55.94 |
| HORVU1Hr1G054630.2 | Barley | plastid | 51.8 | 52.55 |
| Zm00001d047067_P001 | Maize | plastid | 51.8 | 52.55 |
| TraesCS1A01G214600.1 | Wheat | plastid | 51.08 | 51.45 |
| TraesCS1D01G217600.1 | Wheat | plastid | 51.8 | 51.43 |
| TraesCS1B01G228500.1 | Wheat | plastid | 51.08 | 51.08 |
| Os10t0566700-00 | Rice | plastid | 51.08 | 50.71 |
| VIT_15s0021g00830.t01 | Wine grape | plastid | 51.08 | 46.71 |
| HORVU6Hr1G016500.1 | Barley | plastid | 34.53 | 44.04 |
| HORVU3Hr1G111860.1 | Barley | plastid | 27.34 | 35.19 |
Protein Annotations
| MapMan:1.2.1.2.3 | MapMan:19.1.7.3 | Gene3D:2.30.33.40 | GO:A0A078GDK5 | UniProt:A0A078GDK5 | EnsemblPlants:CDY23449 |
| ProteinID:CDY23449 | ProteinID:CDY23449.1 | InterPro:Chaperonin_GroES | InterPro:Chaperonin_GroES_sf | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00022067001 |
| InterPro:GroES-like_sf | InterPro:IPR037124 | PFAM:PF00166 | PANTHER:PTHR10772 | PANTHER:PTHR10772:SF13 | SMART:SM00883 |
| SUPFAM:SSF50129 | UniParc:UPI0004EE0B57 | SEG:seg | : | : | : |
Description
BnaC04g49770DBnaC04g49770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDK5]
Coordinates
chrLK032143:-:523584..524780
Molecular Weight (calculated)
15064.4 Da
IEP (calculated)
9.934
GRAVY (calculated)
0.074
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSTFVSLP KPFFAFSVKT STLPLANHKL LGTRRGCLRV KAISTKWEPT KVVPQADRVL VRLEELAQTT SGGVLLPKAA VKFERYLTGE VVSVGSEVGQ
101: QVGPGKKVLF SDVRAYEVDL GTGARHCFCK ESDLLALVE
101: QVGPGKKVLF SDVRAYEVDL GTGARHCFCK ESDLLALVE
001: MASTFVCSLP NPFFAFPVKA TTPSTANHTL LGSRRGCLRI KAISTKWEPT KVVPQADRVL VRLEDLPIKS SGGVLLPKAA VKFERYLTGE IISVGSEVGQ
101: QVGPGKRVLF SDVSAYEVDL GTDARHCFCK ESDLLALVE
101: QVGPGKRVLF SDVSAYEVDL GTDARHCFCK ESDLLALVE
Arabidopsis Description
CPN10-210 kDa chaperonin 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80504]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.