Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | plastid | 77.86 | 76.22 |
| Solyc01g088610.2.1 | Tomato | plastid | 65.0 | 67.41 |
| CDY48244 | Canola | cytosol, plastid | 50.71 | 66.36 |
| PGSC0003DMT400004324 | Potato | plastid | 62.86 | 65.19 |
| Zm00001d029997_P002 | Maize | plastid | 62.14 | 64.93 |
| Zm00001d002408_P002 | Maize | plastid | 61.43 | 64.18 |
| Os10t0566700-00 | Rice | plastid | 63.57 | 63.57 |
| EER94466 | Sorghum | plastid | 60.71 | 63.43 |
| TraesCS1A01G214600.1 | Wheat | plastid | 62.14 | 63.04 |
| TraesCS1D01G217600.1 | Wheat | plastid | 62.86 | 62.86 |
| Zm00001d047067_P001 | Maize | plastid | 61.43 | 62.77 |
| HORVU1Hr1G054630.2 | Barley | plastid | 61.43 | 62.77 |
| TraesCS1B01G228500.1 | Wheat | plastid | 61.43 | 61.87 |
| AT3G60210.1 | Thale cress | plastid | 60.0 | 60.87 |
| CDY30480 | Canola | plastid | 58.57 | 58.99 |
| CDY23449 | Canola | plastid | 58.57 | 58.99 |
| Bra037640.1-P | Field mustard | plastid | 58.57 | 58.99 |
| KRH66392 | Soybean | plastid | 55.71 | 58.21 |
| KRH48902 | Soybean | plastid | 55.71 | 58.21 |
| Bra004853.1-P | Field mustard | plastid | 57.14 | 57.55 |
| AT2G44650.1 | Thale cress | plastid | 57.14 | 57.55 |
| HORVU6Hr1G016500.1 | Barley | plastid | 42.14 | 54.13 |
| VIT_15s0021g00830.t01 | Wine grape | plastid | 52.14 | 48.03 |
| HORVU3Hr1G111860.1 | Barley | plastid | 35.0 | 45.37 |
Protein Annotations
| MapMan:1.2.1.2.3 | MapMan:19.1.7.3 | Gene3D:2.30.33.40 | InterPro:Chaperonin_GroES | InterPro:Chaperonin_GroES_sf | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr2G18220_001 | EnsemblPlants:GSMUA_Achr2P18220_001 | EnsemblPlants:GSMUA_Achr2T18220_001 | InterPro:GroES-like_sf | InterPro:IPR037124 | UniProt:M0S913 |
| PFAM:PF00166 | PANTHER:PTHR10772 | PANTHER:PTHR10772:SF13 | SMART:SM00883 | SUPFAM:SSF50129 | UniParc:UPI0002966728 |
| SEG:seg | : | : | : | : | : |
Description
Putative 10 kDa chaperonin [Source:GMGC_GENE;Acc:GSMUA_Achr2G18220_001]
Coordinates
chr2:-:18665282..18668465
Molecular Weight (calculated)
15218.5 Da
IEP (calculated)
9.237
GRAVY (calculated)
-0.037
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSLLSAAK TLLYPSQPRT PPPRAGHCFP LWSLHTSRRS ALRVSSLKWE PSKVAPQADR VLIRLEELPE KSAGGVLLPK SAVKFERYIM GKVLSVGSDV
101: AEVEAGKKVL FSDINAYEVD LGTEAKHCFC KAGDLLAVVE
101: AEVEAGKKVL FSDINAYEVD LGTEAKHCFC KAGDLLAVVE
001: MASSFITVPK PFLSFPIKTN APTLPQQTLL GIRRNSFRIN AVSTKWEPAK VVPQADRVLV RLEVLPEKSS GGVLLPKSAV KFERYLTGEV VSVGSEVGEV
101: EPGKKVLFSD MSAYEVDFGT EDAKHCFCKE SDLLAIVQ
101: EPGKKVLFSD MSAYEVDFGT EDAKHCFCKE SDLLAIVQ
Arabidopsis Description
CPN10-110 kDa chaperonin 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1C2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.