Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G44650.1 | Thale cress | plastid | 73.19 | 72.66 |
| Solyc01g088610.2.1 | Tomato | plastid | 68.12 | 69.63 |
| PGSC0003DMT400004324 | Potato | plastid | 67.39 | 68.89 |
| KRH48902 | Soybean | plastid | 60.87 | 62.69 |
| KRH66392 | Soybean | plastid | 59.42 | 61.19 |
| EER94466 | Sorghum | plastid | 58.7 | 60.45 |
| GSMUA_Achr2P18220_001 | Banana | plastid | 60.87 | 60.0 |
| Zm00001d029997_P002 | Maize | plastid | 57.97 | 59.7 |
| Zm00001d002408_P002 | Maize | plastid | 57.97 | 59.7 |
| TraesCS1A01G214600.1 | Wheat | plastid | 58.7 | 58.7 |
| HORVU1Hr1G054630.2 | Barley | plastid | 57.97 | 58.39 |
| GSMUA_Achr11P... | Banana | plastid | 60.14 | 58.04 |
| TraesCS1D01G217600.1 | Wheat | plastid | 58.7 | 57.86 |
| Zm00001d047067_P001 | Maize | plastid | 57.25 | 57.66 |
| TraesCS1B01G228500.1 | Wheat | plastid | 57.97 | 57.55 |
| Os10t0566700-00 | Rice | plastid | 56.52 | 55.71 |
| VIT_15s0021g00830.t01 | Wine grape | plastid | 57.97 | 52.63 |
| HORVU6Hr1G016500.1 | Barley | plastid | 39.13 | 49.54 |
| HORVU3Hr1G111860.1 | Barley | plastid | 31.88 | 40.74 |
Protein Annotations
| MapMan:1.2.1.2.3 | MapMan:19.1.7.3 | Gene3D:2.30.33.40 | EntrezGene:825191 | UniProt:A0A178VCQ5 | ProteinID:AEE80024.1 |
| EMBL:AK228307 | ArrayExpress:AT3G60210 | EnsemblPlantsGene:AT3G60210 | RefSeq:AT3G60210 | TAIR:AT3G60210 | RefSeq:AT3G60210-TAIR-G |
| EnsemblPlants:AT3G60210.1 | TAIR:AT3G60210.1 | EMBL:AY087462 | EMBL:BT005842 | ProteinID:CAB75936.1 | InterPro:Chaperonin_GroES |
| InterPro:Chaperonin_GroES_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005759 | GO:GO:0006457 | GO:GO:0006950 |
| GO:GO:0006986 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0046872 |
| GO:GO:0051082 | GO:GO:0051085 | GO:GO:0051087 | InterPro:GroES-like_sf | InterPro:IPR037124 | RefSeq:NP_191580.1 |
| ProteinID:OAP02652.1 | PFAM:PF00166 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00297 | PANTHER:PTHR10772 | PANTHER:PTHR10772:SF13 | UniProt:Q9M1C2 |
| SMART:SM00883 | SUPFAM:SSF50129 | UniParc:UPI0000060D65 | SEG:seg | : | : |
Description
CPN10-110 kDa chaperonin 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1C2]
Coordinates
chr3:-:22251047..22252899
Molecular Weight (calculated)
15141.4 Da
IEP (calculated)
8.209
GRAVY (calculated)
-0.007
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSFITVPK PFLSFPIKTN APTLPQQTLL GIRRNSFRIN AVSTKWEPAK VVPQADRVLV RLEVLPEKSS GGVLLPKSAV KFERYLTGEV VSVGSEVGEV
101: EPGKKVLFSD MSAYEVDFGT EDAKHCFCKE SDLLAIVQ
101: EPGKKVLFSD MSAYEVDFGT EDAKHCFCKE SDLLAIVQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.