Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G054630.2 | Barley | plastid | 94.93 | 95.62 |
| TraesCS1B01G228500.1 | Wheat | plastid | 94.93 | 94.24 |
| TraesCS1D01G217600.1 | Wheat | plastid | 94.93 | 93.57 |
| HORVU6Hr1G016500.1 | Barley | plastid | 70.29 | 88.99 |
| Os10t0566700-00 | Rice | plastid | 83.33 | 82.14 |
| EER94466 | Sorghum | plastid | 72.46 | 74.63 |
| Zm00001d047067_P001 | Maize | plastid | 73.91 | 74.45 |
| Zm00001d029997_P002 | Maize | plastid | 69.57 | 71.64 |
| Zm00001d002408_P002 | Maize | plastid | 68.84 | 70.9 |
| GSMUA_Achr11P... | Banana | plastid | 67.39 | 65.03 |
| GSMUA_Achr2P18220_001 | Banana | plastid | 63.04 | 62.14 |
| PGSC0003DMT400004324 | Potato | plastid | 60.14 | 61.48 |
| Solyc01g088610.2.1 | Tomato | plastid | 60.14 | 61.48 |
| CDY48244 | Canola | cytosol, plastid | 46.38 | 59.81 |
| KRH66392 | Soybean | plastid | 57.25 | 58.96 |
| AT3G60210.1 | Thale cress | plastid | 58.7 | 58.7 |
| KRH48902 | Soybean | plastid | 56.52 | 58.21 |
| CDY23449 | Canola | plastid | 51.45 | 51.08 |
| AT2G44650.1 | Thale cress | plastid | 51.45 | 51.08 |
| CDY30480 | Canola | plastid | 50.72 | 50.36 |
| Bra037640.1-P | Field mustard | plastid | 50.72 | 50.36 |
| Bra004853.1-P | Field mustard | plastid | 50.0 | 49.64 |
| VIT_15s0021g00830.t01 | Wine grape | plastid | 50.72 | 46.05 |
Protein Annotations
| MapMan:1.2.1.2.3 | MapMan:19.1.7.3 | Gene3D:2.30.33.40 | InterPro:Chaperonin_GroES | InterPro:Chaperonin_GroES_sf | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:GroES-like_sf | InterPro:IPR037124 | PFAM:PF00166 | PRINTS:PR00297 | PANTHER:PTHR10772 | PANTHER:PTHR10772:SF13 |
| SMART:SM00883 | SUPFAM:SSF50129 | EnsemblPlantsGene:TraesCS1A01G214600 | EnsemblPlants:TraesCS1A01G214600.1 | TIGR:cd00320 | SEG:seg |
Description
No Description!
Coordinates
chr1A:-:377499646..377502570
Molecular Weight (calculated)
14544.6 Da
IEP (calculated)
7.442
GRAVY (calculated)
0.121
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSLLAAAA SASPFLLHGA AGSASRRPVA PGRRAASSVR VHAAIKCDPS KVEPQSDRVL VRLETIPEKS AGGVLLPKSA VKFERYLMGE ILSVGVDVSE
101: VEAGKKVLFS DINAYEVDLG TEEKHCFCRE SDLLAVVA
101: VEAGKKVLFS DINAYEVDLG TEEKHCFCRE SDLLAVVA
001: MASSFITVPK PFLSFPIKTN APTLPQQTLL GIRRNSFRIN AVSTKWEPAK VVPQADRVLV RLEVLPEKSS GGVLLPKSAV KFERYLTGEV VSVGSEVGEV
101: EPGKKVLFSD MSAYEVDFGT EDAKHCFCKE SDLLAIVQ
101: EPGKKVLFSD MSAYEVDFGT EDAKHCFCKE SDLLAIVQ
Arabidopsis Description
CPN10-110 kDa chaperonin 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1C2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.