CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum

Predictor Summary:

plastid 4
mitochondrion 4
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50384	Soybean	mitochondrion	76.23	95.88
VIT_01s0011g04990.t01	Wine grape	mitochondrion	65.57	82.47
KRH66747	Soybean	cytosol, mitochondrion	64.75	81.44
KRG95075	Soybean	mitochondrion	63.93	80.41
PGSC0003DMT400073969	Potato	cytosol, mitochondrion	62.3	78.35
Solyc07g008800.2.1	Tomato	plastid	62.3	78.35
Solyc05g056390.2.1	Tomato	plastid	61.48	77.32
AT1G23100.1	Thale cress	cytosol, mitochondrion	60.66	76.29
VIT_08s0040g01150.t01	Wine grape	cytosol, mitochondrion	60.66	76.29
CDY04743	Canola	mitochondrion	58.2	73.2
Bra024563.1-P	Field mustard	mitochondrion	51.64	72.41
CDY21417	Canola	mitochondrion, plastid	56.56	71.13
PGSC0003DMT400060280	Potato	mitochondrion	59.84	70.87
KRH65868	Soybean	mitochondrion	46.72	61.96
KRH55636	Soybean	cytosol, mitochondrion, nucleus	36.07	48.35

Protein Annotations

MapMan:19.1.7.3	Gene3D:2.30.33.40	EMBL:ACUP02012200	InterPro:Chaperonin_GroES	InterPro:Chaperonin_GroES_sf	EnsemblPlantsGene:GLYMA_20G017200
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006457	GO:GO:0006950	GO:GO:0006986
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0046872	GO:GO:0051082
GO:GO:0051085	GO:GO:0051087	InterPro:GroES-like_sf	UniProt:I1ND95	InterPro:IPR037124	EnsemblPlants:KRG89335
ProteinID:KRG89335	ProteinID:KRG89335.1	PFAM:PF00166	PRINTS:PR00297	PANTHER:PTHR10772	PANTHER:PTHR10772:SF25
SMART:SM00883	SUPFAM:SSF50129	TMHMM:TMhelix	UniParc:UPI00023DD9D6	SEG:seg	:

Description

hypothetical protein

Coordinates

chr20:+:1684963..1685838

Molecular Weight (calculated)

13771.0 Da

IEP (calculated)

7.439

GRAVY (calculated)

0.253

Length

122 amino acids

Sequence
(BLAST)

001: MAKRLIPCFN RILIEKIVPP SKTSAGILLP EKTSQLNSGK VIAVGPGSRD KAGNLIPVSV KEGDHVLLPE YGGTQIKLDD KEYGFEIVFC VSFTYWFLFI
101: FLLLFCRFHL FRDEDILGIL HD

Best Arabidopsis Sequence Match ( AT1G23100.1 )
(BLAST)

1: MAKRLIPTLN RVLVEKILPP SKTVSGILLP EKSSQLNSGR VIAVGPGARD RAGNLIPVSV KEGDNVLLPE FGGTQVKLGE KEFLLYRDED IMATLHE

Arabidopsis Description

GroES-like family protein [Source:UniProtKB/TrEMBL;Acc:Q8LDC9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.