Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDY68953 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G23100.1 | CDY68953 | AT1G52695.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21417 | Canola | mitochondrion, plastid | 96.91 | 96.91 |
| AT1G23100.1 | Thale cress | cytosol, mitochondrion | 93.81 | 93.81 |
| Bra024563.1-P | Field mustard | mitochondrion | 83.51 | 93.1 |
| Solyc05g056390.2.1 | Tomato | plastid | 78.35 | 78.35 |
| VIT_01s0011g04990.t01 | Wine grape | mitochondrion | 76.29 | 76.29 |
| PGSC0003DMT400073969 | Potato | cytosol, mitochondrion | 76.29 | 76.29 |
| KRH50384 | Soybean | mitochondrion | 76.29 | 76.29 |
| Solyc07g008800.2.1 | Tomato | plastid | 75.26 | 75.26 |
| CDY36520 | Canola | mitochondrion | 74.23 | 73.47 |
| VIT_08s0040g01150.t01 | Wine grape | cytosol, mitochondrion | 73.2 | 73.2 |
| CDY39593 | Canola | mitochondrion | 73.2 | 72.45 |
| CDY52023 | Canola | mitochondrion | 72.16 | 71.43 |
| CDY33726 | Canola | mitochondrion | 72.16 | 71.43 |
| CDX83998 | Canola | mitochondrion | 72.16 | 71.43 |
| PGSC0003DMT400060280 | Potato | mitochondrion | 75.26 | 70.87 |
| CDX81688 | Canola | mitochondrion | 70.1 | 69.39 |
| KRG89335 | Soybean | endoplasmic reticulum, mitochondrion | 73.2 | 58.2 |
Protein Annotations
| MapMan:19.1.7.3 | Gene3D:2.30.33.40 | GO:A0A078EYM0 | EnsemblPlants:CDY04743 | ProteinID:CDY04743 | ProteinID:CDY04743.1 |
| InterPro:Chaperonin_GroES | InterPro:Chaperonin_GroES_sf | InterPro:Chaprnonin_Cpn10_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006457 |
| GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00119401001 | InterPro:GroES-like_sf | InterPro:IPR037124 | PFAM:PF00166 |
| PRINTS:PR00297 | ScanProsite:PS00681 | PANTHER:PTHR10772 | PANTHER:PTHR10772:SF25 | SMART:SM00883 | SUPFAM:SSF50129 |
| UniParc:UPI0004EE42EF | : | : | : | : | : |
Description
BnaC05g18460D
Coordinates
chrLK031957:-:334298..334914
Molecular Weight (calculated)
10600.9 Da
IEP (calculated)
7.543
GRAVY (calculated)
-0.110
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKRLIPTLN RVLVEKILQP SKTVSGILLP ETSSQLNSGR VIAVGPGARD RTGNLIPVSV KEGDNVLLPE FGGTQVKLGE KEFFLYRDED LMATLHD
1: MAKRLIPTLN RVLVEKILPP SKTVSGILLP EKSSQLNSGR VIAVGPGARD RAGNLIPVSV KEGDNVLLPE FGGTQVKLGE KEFLLYRDED IMATLHE
Arabidopsis Description
GroES-like family protein [Source:UniProtKB/TrEMBL;Acc:Q8LDC9]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.