Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g056390.2.1 | Tomato | plastid | 89.32 | 94.85 |
| PGSC0003DMT400073969 | Potato | cytosol, mitochondrion | 88.35 | 93.81 |
| AT1G23100.1 | Thale cress | cytosol, mitochondrion | 71.84 | 76.29 |
| VIT_01s0011g04990.t01 | Wine grape | mitochondrion | 71.84 | 76.29 |
| VIT_08s0040g01150.t01 | Wine grape | cytosol, mitochondrion | 71.84 | 76.29 |
| CDY04743 | Canola | mitochondrion | 70.87 | 75.26 |
| KRH50384 | Soybean | mitochondrion | 70.87 | 75.26 |
| Bra024563.1-P | Field mustard | mitochondrion | 62.14 | 73.56 |
| CDY21417 | Canola | mitochondrion, plastid | 68.93 | 73.2 |
| KRG89335 | Soybean | endoplasmic reticulum, mitochondrion | 70.87 | 59.84 |
Protein Annotations
| MapMan:19.1.7.3 | Gene3D:2.30.33.40 | InterPro:Chaperonin_GroES | InterPro:Chaperonin_GroES_sf | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | InterPro:GroES-like_sf |
| InterPro:IPR037124 | UniProt:M1C5I8 | PFAM:PF00166 | EnsemblPlantsGene:PGSC0003DMG402023448 | PGSC:PGSC0003DMG402023448 | EnsemblPlants:PGSC0003DMT400060280 |
| PRINTS:PR00297 | PANTHER:PTHR10772 | PANTHER:PTHR10772:SF25 | SMART:SM00883 | SUPFAM:SSF50129 | UniParc:UPI000295EFF0 |
Description
10kDa chaperonin (CPN10) protein [Source:PGSC_GENE;Acc:PGSC0003DMG402023448]
Coordinates
chr5:+:51856785..51858427
Molecular Weight (calculated)
11143.6 Da
IEP (calculated)
9.513
GRAVY (calculated)
-0.147
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKRLIPTLN RVLIEKITAP AKTSAGILLP EKSSKLNSGK VVAVGPGLHD KTGNLIPTAV KEGDTVLLPE YGGTQVKLGE KEFHLYRDED IFGDTARLSI
101: YNI
101: YNI
1: MAKRLIPTLN RVLVEKILPP SKTVSGILLP EKSSQLNSGR VIAVGPGARD RAGNLIPVSV KEGDNVLLPE FGGTQVKLGE KEFLLYRDED IMATLHE
Arabidopsis Description
GroES-like family protein [Source:UniProtKB/TrEMBL;Acc:Q8LDC9]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.