Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDY68953 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G23100.1 | CDY68953 | AT1G52695.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04743 | Canola | mitochondrion | 96.91 | 96.91 |
| Bra024563.1-P | Field mustard | mitochondrion | 83.51 | 93.1 |
| AT1G23100.1 | Thale cress | cytosol, mitochondrion | 92.78 | 92.78 |
| Solyc05g056390.2.1 | Tomato | plastid | 76.29 | 76.29 |
| VIT_01s0011g04990.t01 | Wine grape | mitochondrion | 74.23 | 74.23 |
| PGSC0003DMT400073969 | Potato | cytosol, mitochondrion | 74.23 | 74.23 |
| KRH50384 | Soybean | mitochondrion | 74.23 | 74.23 |
| Solyc07g008800.2.1 | Tomato | plastid | 73.2 | 73.2 |
| CDY36520 | Canola | mitochondrion | 73.2 | 72.45 |
| CDY39593 | Canola | mitochondrion | 72.16 | 71.43 |
| VIT_08s0040g01150.t01 | Wine grape | cytosol, mitochondrion | 71.13 | 71.13 |
| CDY52023 | Canola | mitochondrion | 71.13 | 70.41 |
| CDY33726 | Canola | mitochondrion | 71.13 | 70.41 |
| CDX83998 | Canola | mitochondrion | 71.13 | 70.41 |
| PGSC0003DMT400060280 | Potato | mitochondrion | 73.2 | 68.93 |
| CDX81688 | Canola | mitochondrion | 69.07 | 68.37 |
| KRG89335 | Soybean | endoplasmic reticulum, mitochondrion | 71.13 | 56.56 |
Protein Annotations
| MapMan:19.1.7.3 | Gene3D:2.30.33.40 | GO:A0A078G8T4 | UniProt:A0A078G8T4 | EnsemblPlants:CDY21417 | ProteinID:CDY21417 |
| ProteinID:CDY21417.1 | InterPro:Chaperonin_GroES | InterPro:Chaperonin_GroES_sf | InterPro:Chaprnonin_Cpn10_CS | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00015803001 | InterPro:GroES-like_sf | InterPro:IPR037124 |
| PFAM:PF00166 | PRINTS:PR00297 | ScanProsite:PS00681 | PANTHER:PTHR10772 | PANTHER:PTHR10772:SF25 | SMART:SM00883 |
| SUPFAM:SSF50129 | UniParc:UPI0004EEE7E7 | : | : | : | : |
Description
BnaA09g30100DBnaA09g30100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8T4]
Coordinates
chrLK032120:+:588409..588972
Molecular Weight (calculated)
10639.9 Da
IEP (calculated)
5.870
GRAVY (calculated)
-0.214
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKRLIPTLN RVLVEKNLQP SKTVSGILLP ETSSQLNSGR VIAVGPGARD RTENLIPVSV KEGDNVLLPE FGGTQVKLGE KEFLLYRDED LMATLHD
1: MAKRLIPTLN RVLVEKILPP SKTVSGILLP EKSSQLNSGR VIAVGPGARD RAGNLIPVSV KEGDNVLLPE FGGTQVKLGE KEFLLYRDED IMATLHE
Arabidopsis Description
GroES-like family protein [Source:UniProtKB/TrEMBL;Acc:Q8LDC9]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.