CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39593	Canola	mitochondrion	98.98	98.98
CDX83998	Canola	mitochondrion	97.96	97.96
CDY52023	Canola	mitochondrion	97.96	97.96
CDY33726	Canola	mitochondrion	96.94	96.94
CDX81688	Canola	mitochondrion	93.88	93.88
KRH66747	Soybean	cytosol, mitochondrion	75.51	76.29
GSMUA_Achr8P21710_001	Banana	mitochondrion	75.51	76.29
KRG95075	Soybean	mitochondrion	74.49	75.26
VIT_06s0009g02550.t01	Wine grape	cytosol, mitochondrion	74.49	75.26
CDY04743	Canola	mitochondrion	73.47	74.23
CDY21417	Canola	mitochondrion, plastid	72.45	73.2
GSMUA_AchrUn_...	Banana	mitochondrion	71.43	72.16
GSMUA_Achr4P10770_001	Banana	mitochondrion	69.39	70.1
TraesCS2D01G150600.1	Wheat	mitochondrion	70.41	69.0
TraesCS2B01G171400.1	Wheat	mitochondrion	70.41	69.0
TraesCS2A01G146000.1	Wheat	mitochondrion	70.41	69.0
EER92223	Sorghum	mitochondrion	67.35	68.04
Os07t0641700-01	Rice	mitochondrion	67.35	67.35
Os03t0366000-01	Rice	mitochondrion	66.33	66.33
Zm00001d029263_P001	Maize	mitochondrion	65.31	65.98
EER97627	Sorghum	mitochondrion	64.29	64.29
Zm00001d022307_P003	Maize	mitochondrion	64.29	63.64
Zm00001d007031_P002	Maize	mitochondrion	63.27	62.63
Bra026173.1-P	Field mustard	mitochondrion	85.71	61.31
KRH65868	Soybean	mitochondrion	53.06	56.52
KRH55636	Soybean	cytosol, mitochondrion, nucleus	46.94	50.55
HORVU2Hr1G025930.4	Barley	cytosol	58.16	45.97
Zm00001d019958_P001	Maize	mitochondrion	33.67	44.59

Protein Annotations

MapMan:19.1.7.3	Gene3D:2.30.33.40	GO:A0A078HDW9	UniProt:A0A078HDW9	EnsemblPlants:CDY36520	ProteinID:CDY36520
ProteinID:CDY36520.1	InterPro:Chaperonin_GroES	InterPro:Chaperonin_GroES_sf	InterPro:Chaprnonin_Cpn10_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00062196001	InterPro:GroES-like_sf	InterPro:IPR037124
PFAM:PF00166	PRINTS:PR00297	ScanProsite:PS00681	PANTHER:PTHR10772	PANTHER:PTHR10772:SF25	SMART:SM00883
SUPFAM:SSF50129	UniParc:UPI0004EE0C60	:	:	:	:

Description

BnaA06g09730DBnaA06g09730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDW9]

Coordinates

chrLK032378:-:4395..5448

Molecular Weight (calculated)

10839.2 Da

IEP (calculated)

9.002

GRAVY (calculated)

-0.342

Length

98 amino acids

Sequence
(BLAST)

1: MMKRLIPTFN RILVQRVIQP AKTESGILLP EKASKLNSGR VIAVGPGSRD KDGKLIPVSV KEGDTVLLPE YGGTQVKLGE KEYHLFRDED VLGTLHED

Best Arabidopsis Sequence Match ( AT1G14980.1 )
(BLAST)

1: MMKRLIPTFN RILVQRVIQP AKTESGILLP EKSSKLNSGK VIAVGPGSRD KDGKLIPVSV KEGDTVLLPE YGGTQVKLGE NEYHLFRDED VLGTLHED

Arabidopsis Description

CPN1010 kDa chaperonin, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34893]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.