Factsheet for Zm00001d029263_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

plastid: 23198870
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92223	Sorghum	mitochondrion	93.81	93.81
Os03t0366000-01	Rice	mitochondrion	88.66	87.76
Zm00001d022307_P003	Maize	mitochondrion	83.51	81.82
Zm00001d007031_P002	Maize	mitochondrion	81.44	79.8
GSMUA_AchrUn_...	Banana	mitochondrion	75.26	75.26
GSMUA_Achr8P21710_001	Banana	mitochondrion	75.26	75.26
VIT_06s0009g02550.t01	Wine grape	cytosol, mitochondrion	73.2	73.2
KRH66747	Soybean	cytosol, mitochondrion	69.07	69.07
KRG95075	Soybean	mitochondrion	69.07	69.07
GSMUA_Achr4P10770_001	Banana	mitochondrion	68.04	68.04
CDY39593	Canola	mitochondrion	67.01	66.33
CDY52023	Canola	mitochondrion	65.98	65.31
AT1G14980.1	Thale cress	mitochondrion	65.98	65.31
CDY36520	Canola	mitochondrion	65.98	65.31
CDY33726	Canola	mitochondrion	65.98	65.31
CDX83998	Canola	mitochondrion	65.98	65.31
Bra016677.1-P	Field mustard	mitochondrion	65.98	65.31
CDX81688	Canola	mitochondrion	63.92	63.27
Bra026789.1-P	Field mustard	mitochondrion	63.92	63.27
Zm00001d019958_P001	Maize	mitochondrion	47.42	62.16
KRH65868	Soybean	mitochondrion	50.52	53.26
KRH55636	Soybean	cytosol, mitochondrion, nucleus	44.33	47.25
Bra026173.1-P	Field mustard	mitochondrion	58.76	41.61

Protein Annotations

EntrezGene:100282681	EntrezGene:100286239	MapMan:19.1.7.3	Gene3D:2.30.33.40	UniProt:B6TAA7	InterPro:Chaperonin_GroES
InterPro:Chaperonin_GroES_sf	EMBL:EU961922	EMBL:EU976313	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	InterPro:GroES-like_sf	InterPro:IPR037124
ProteinID:ONL98339.1	PFAM:PF00166	PRINTS:PR00297	PANTHER:PTHR10772	PANTHER:PTHR10772:SF12	SMART:SM00883
SUPFAM:SSF50129	UniParc:UPI000182D134	EnsemblPlantsGene:Zm00001d029263	EnsemblPlants:Zm00001d029263_P001	EnsemblPlants:Zm00001d029263_T001	:

Description

Chaperonin

Coordinates

chr1:-:64042656..64045687

Molecular Weight (calculated)

10578.0 Da

IEP (calculated)

7.533

GRAVY (calculated)

-0.192

Length

97 amino acids

Sequence
(BLAST)

1: MAKRLIPSLN RVLVEKLLKP SKSAGGILLP ETTKQLNAAK VVAVGPGDRD RDGKLIPVSL SEGDTVLLPE YGGTEVKLAE KEYLLFREHD ILGKLEE

Best Arabidopsis Sequence Match ( AT1G23100.1 )
(BLAST)

1: MAKRLIPTLN RVLVEKILPP SKTVSGILLP EKSSQLNSGR VIAVGPGARD RAGNLIPVSV KEGDNVLLPE FGGTQVKLGE KEFLLYRDED IMATLHE

Arabidopsis Description

GroES-like family protein [Source:UniProtKB/TrEMBL;Acc:Q8LDC9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.