Factsheet for Os03t0366000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867
plastid: 27992503

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029263_P001	Maize	mitochondrion	87.76	88.66
EER92223	Sorghum	mitochondrion	85.71	86.6
Os07t0641700-01	Rice	mitochondrion	84.69	84.69
GSMUA_Achr8P21710_001	Banana	mitochondrion	72.45	73.2
GSMUA_AchrUn_...	Banana	mitochondrion	71.43	72.16
VIT_06s0009g02550.t01	Wine grape	cytosol, mitochondrion	67.35	68.04
CDY39593	Canola	mitochondrion	67.35	67.35
KRG95075	Soybean	mitochondrion	66.33	67.01
KRH66747	Soybean	cytosol, mitochondrion	66.33	67.01
Bra016677.1-P	Field mustard	mitochondrion	66.33	66.33
CDX83998	Canola	mitochondrion	66.33	66.33
CDY33726	Canola	mitochondrion	66.33	66.33
CDY36520	Canola	mitochondrion	66.33	66.33
CDY52023	Canola	mitochondrion	66.33	66.33
AT1G14980.1	Thale cress	mitochondrion	66.33	66.33
GSMUA_Achr4P10770_001	Banana	mitochondrion	64.29	64.95
CDX81688	Canola	mitochondrion	64.29	64.29
Bra026789.1-P	Field mustard	mitochondrion	64.29	64.29
KRH65868	Soybean	mitochondrion	48.98	52.17
KRH55636	Soybean	cytosol, mitochondrion, nucleus	45.92	49.45
Bra026173.1-P	Field mustard	mitochondrion	59.18	42.34

Protein Annotations

MapMan:19.1.7.3	Gene3D:2.30.33.40	EntrezGene:4332912	ProteinID:ABF96126.1	EMBL:AK241807	ProteinID:BAS84320.1
InterPro:Chaperonin_GroES	InterPro:Chaperonin_GroES_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006457
GO:GO:0006950	GO:GO:0006986	GO:GO:0008150	GO:GO:0009987	GO:GO:0046872	GO:GO:0051082
GO:GO:0051085	GO:GO:0051087	InterPro:GroES-like_sf	InterPro:IPR037124	HAMAP:MF_00580	EnsemblPlantsGene:Os03g0366000
EnsemblPlants:Os03t0366000-01	PFAM:PF00166	PRINTS:PR00297	PANTHER:PTHR10772	PANTHER:PTHR10772:SF12	UniProt:Q10KY5
SMART:SM00883	SUPFAM:SSF50129	UniParc:UPI0000DB4DCB	RefSeq:XP_015628692.1	:	:

Description

Similar to Chaperonin. (Os03t0366000-01)

Coordinates

chr3:-:14298449..14301345

Molecular Weight (calculated)

10821.3 Da

IEP (calculated)

7.536

GRAVY (calculated)

-0.285

Length

98 amino acids

Sequence
(BLAST)

1: MAARRLIPSM NRVLVEKLLQ PNKSAGGILL PETTKQLNSA KVVAVGPGER DRDGKLIPVS LKEGDTVLLP EYGGTEVKLA EKEYLLFREH DILGRLEE

Best Arabidopsis Sequence Match ( AT1G14980.1 )
(BLAST)

1: MMKRLIPTFN RILVQRVIQP AKTESGILLP EKSSKLNSGK VIAVGPGSRD KDGKLIPVSV KEGDTVLLPE YGGTQVKLGE NEYHLFRDED VLGTLHED

Arabidopsis Description

CPN1010 kDa chaperonin, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34893]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.