Factsheet for GSMUA_AchrUn_randomP14130_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 7
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P21710_001	Banana	mitochondrion	90.72	90.72
VIT_06s0009g02550.t01	Wine grape	cytosol, mitochondrion	81.44	81.44
KRG95075	Soybean	mitochondrion	81.44	81.44
GSMUA_Achr4P10770_001	Banana	mitochondrion	81.44	81.44
KRH66747	Soybean	cytosol, mitochondrion	80.41	80.41
Zm00001d029263_P001	Maize	mitochondrion	75.26	75.26
Os07t0641700-01	Rice	mitochondrion	75.26	74.49
EER92223	Sorghum	mitochondrion	73.2	73.2
CDY39593	Canola	mitochondrion	73.2	72.45
Bra016677.1-P	Field mustard	mitochondrion	72.16	71.43
Os03t0366000-01	Rice	mitochondrion	72.16	71.43
CDY52023	Canola	mitochondrion	72.16	71.43
AT1G14980.1	Thale cress	mitochondrion	72.16	71.43
CDX83998	Canola	mitochondrion	72.16	71.43
CDY36520	Canola	mitochondrion	72.16	71.43
CDY33726	Canola	mitochondrion	71.13	70.41
TraesCS2D01G150600.1	Wheat	mitochondrion	72.16	70.0
TraesCS2B01G171400.1	Wheat	mitochondrion	72.16	70.0
TraesCS2A01G146000.1	Wheat	mitochondrion	72.16	70.0
EER97627	Sorghum	mitochondrion	70.1	69.39
Zm00001d007031_P002	Maize	mitochondrion	70.1	68.69
Zm00001d022307_P003	Maize	mitochondrion	70.1	68.69
CDX81688	Canola	mitochondrion	69.07	68.37
Bra026789.1-P	Field mustard	mitochondrion	69.07	68.37
KRH65868	Soybean	mitochondrion	57.73	60.87
OQU81064	Sorghum	mitochondrion	41.24	52.63
OQU88508	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	38.14	50.0
KXG24557	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	38.14	50.0
Zm00001d019958_P001	Maize	mitochondrion	37.11	48.65
KRH55636	Soybean	cytosol, mitochondrion, nucleus	45.36	48.35
HORVU2Hr1G025930.4	Barley	cytosol	60.82	47.58
Bra026173.1-P	Field mustard	mitochondrion	64.95	45.99
OQU91489	Sorghum	cytosol	37.11	44.44

Protein Annotations

MapMan:19.1.7.3	Gene3D:2.30.33.40	InterPro:Chaperonin_GroES	InterPro:Chaperonin_GroES_sf	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_AchrUn_randomG14130_001
EnsemblPlants:GSMUA_AchrUn_randomP14130_001	EnsemblPlants:GSMUA_AchrUn_randomT14130_001	InterPro:GroES-like_sf	InterPro:IPR037124	UniProt:M0U922	PFAM:PF00166
PRINTS:PR00297	PANTHER:PTHR10772	PANTHER:PTHR10772:SF25	SMART:SM00883	SUPFAM:SSF50129	UniParc:UPI0002969EC8

Description

10 kDa chaperonin [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG14130_001]

Coordinates

chrchrUn_random:-:66099761..66104245

Molecular Weight (calculated)

10505.9 Da

IEP (calculated)

6.605

GRAVY (calculated)

-0.091

Length

97 amino acids

Sequence
(BLAST)

1: MARRLIPSLN RVLVEKIIPP SKTSAGILLP EKTTKLNSGK VIAIGPGARD RDGKLIPVCV SEGDTVLLPE YGGTEVKLGE KEYLLYRDDD ILGTLCD

Best Arabidopsis Sequence Match ( AT1G23100.1 )
(BLAST)

1: MAKRLIPTLN RVLVEKILPP SKTVSGILLP EKSSQLNSGR VIAVGPGARD RAGNLIPVSV KEGDNVLLPE FGGTQVKLGE KEFLLYRDED IMATLHE

Arabidopsis Description

GroES-like family protein [Source:UniProtKB/TrEMBL;Acc:Q8LDC9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.