Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24557 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion | 87.84 | 87.84 |
| OQU81064 | Sorghum | mitochondrion | 51.35 | 50.0 |
| EER92223 | Sorghum | mitochondrion | 55.41 | 42.27 |
| OQU91489 | Sorghum | cytosol | 43.24 | 39.51 |
| GSMUA_Achr8P21710_001 | Banana | mitochondrion | 50.0 | 38.14 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 50.0 | 38.14 |
| EER97627 | Sorghum | mitochondrion | 48.65 | 36.73 |
| KRH55636 | Soybean | cytosol, mitochondrion, nucleus | 44.59 | 36.26 |
| KRG95075 | Soybean | mitochondrion | 45.95 | 35.05 |
| KRH66747 | Soybean | cytosol, mitochondrion | 45.95 | 35.05 |
| VIT_06s0009g02550.t01 | Wine grape | cytosol, mitochondrion | 45.95 | 35.05 |
| KRH65868 | Soybean | mitochondrion | 43.24 | 34.78 |
| GSMUA_Achr4P10770_001 | Banana | mitochondrion | 41.89 | 31.96 |
Protein Annotations
| EnsemblPlants:OQU88508 | EnsemblPlantsGene:SORBI_3002G047333 | Gene3D:2.30.33.40 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | InterPro:Chaperonin_GroES | InterPro:Chaperonin_GroES_sf |
| InterPro:GroES-like_sf | InterPro:IPR037124 | PANTHER:PTHR10772 | PANTHER:PTHR10772:SF12 | PFAM:PF00166 | ProteinID:OQU88508 |
| ProteinID:OQU88508.1 | SUPFAM:SSF50129 | UniParc:UPI0009DC8E92 | UniProt:A0A1W0W289 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr2:+:4440268..4441135
Molecular Weight (calculated)
8008.8 Da
IEP (calculated)
7.349
GRAVY (calculated)
0.284
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MLNAAKVIAV GLGDRDRDGK LIRVSLSEGD TVLLPEYGGT EVKLRKSMLT YACHFDLALY SLSPSFSVAV ALYT
1: MMKRLIPTFN RILVQRVIQP AKTESGILLP EKSSKLNSGK VIAVGPGSRD KDGKLIPVSV KEGDTVLLPE YGGTQVKLGE ND
Arabidopsis Description
CPN1010 kDa chaperonin, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34893]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.