Factsheet for GSMUA_Achr4P10770_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P21710_001	Banana	mitochondrion	86.6	86.6
VIT_06s0009g02550.t01	Wine grape	cytosol, mitochondrion	83.51	83.51
KRG95075	Soybean	mitochondrion	83.51	83.51
KRH66747	Soybean	cytosol, mitochondrion	82.47	82.47
GSMUA_AchrUn_...	Banana	mitochondrion	81.44	81.44
EER97627	Sorghum	mitochondrion	71.13	70.41
CDY39593	Canola	mitochondrion	71.13	70.41
Zm00001d007031_P002	Maize	mitochondrion	71.13	69.7
Zm00001d022307_P003	Maize	mitochondrion	71.13	69.7
CDY52023	Canola	mitochondrion	70.1	69.39
CDY36520	Canola	mitochondrion	70.1	69.39
CDX83998	Canola	mitochondrion	70.1	69.39
AT1G14980.1	Thale cress	mitochondrion	70.1	69.39
Bra016677.1-P	Field mustard	mitochondrion	70.1	69.39
CDY33726	Canola	mitochondrion	69.07	68.37
CDX81688	Canola	mitochondrion	69.07	68.37
Bra026789.1-P	Field mustard	mitochondrion	69.07	68.37
Os07t0641700-01	Rice	mitochondrion	69.07	68.37
Zm00001d029263_P001	Maize	mitochondrion	68.04	68.04
EER92223	Sorghum	mitochondrion	64.95	64.95
Os03t0366000-01	Rice	mitochondrion	64.95	64.29
KRH65868	Soybean	mitochondrion	60.82	64.13
TraesCS2A01G146000.1	Wheat	mitochondrion	65.98	64.0
TraesCS2B01G171400.1	Wheat	mitochondrion	65.98	64.0
TraesCS2D01G150600.1	Wheat	mitochondrion	65.98	64.0
KRH55636	Soybean	cytosol, mitochondrion, nucleus	48.45	51.65
Zm00001d019958_P001	Maize	mitochondrion	38.14	50.0
HORVU2Hr1G025930.4	Barley	cytosol	56.7	44.35
Bra026173.1-P	Field mustard	mitochondrion	60.82	43.07
OQU81064	Sorghum	mitochondrion	32.99	42.11
KXG24557	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	31.96	41.89
OQU88508	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	31.96	41.89
OQU91489	Sorghum	cytosol	31.96	38.27

Protein Annotations

MapMan:19.1.7.3	Gene3D:2.30.33.40	InterPro:Chaperonin_GroES	InterPro:Chaperonin_GroES_sf	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr4G10770_001
EnsemblPlants:GSMUA_Achr4P10770_001	EnsemblPlants:GSMUA_Achr4T10770_001	InterPro:GroES-like_sf	InterPro:IPR037124	UniProt:M0SMU4	PFAM:PF00166
PRINTS:PR00297	PANTHER:PTHR10772	PANTHER:PTHR10772:SF8	SMART:SM00883	SUPFAM:SSF50129	UniParc:UPI000294D909

Description

10 kDa chaperonin [Source:GMGC_GENE;Acc:GSMUA_Achr4G10770_001]

Coordinates

chr4:+:7817119..7820649

Molecular Weight (calculated)

10465.8 Da

IEP (calculated)

7.606

GRAVY (calculated)

-0.151

Length

97 amino acids

Sequence
(BLAST)

1: MAKRLIPSLN RILVEKIVPP SKTSAGILLP EKTTKLNSGK VVAVGPGFHC SNGNLIPISV KEGDTVLLPE YGGTEVKLGD KEYHLYKDDD ILGTLHD

Best Arabidopsis Sequence Match ( AT1G23100.1 )
(BLAST)

1: MAKRLIPTLN RVLVEKILPP SKTVSGILLP EKSSQLNSGR VIAVGPGARD RAGNLIPVSV KEGDNVLLPE FGGTQVKLGE KEFLLYRDED IMATLHE

Arabidopsis Description

GroES-like family protein [Source:UniProtKB/TrEMBL;Acc:Q8LDC9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.