CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022307_P003	Maize	mitochondrion	100.0	98.99
Zm00001d007031_P002	Maize	mitochondrion	97.96	96.97
Os07t0641700-01	Rice	mitochondrion	90.82	90.82
EER92223	Sorghum	mitochondrion	81.63	82.47
TraesCS2D01G150600.1	Wheat	mitochondrion	76.53	75.0
TraesCS2B01G171400.1	Wheat	mitochondrion	76.53	75.0
TraesCS2A01G146000.1	Wheat	mitochondrion	76.53	75.0
GSMUA_Achr8P21710_001	Banana	mitochondrion	71.43	72.16
VIT_06s0009g02550.t01	Wine grape	cytosol, mitochondrion	70.41	71.13
GSMUA_Achr4P10770_001	Banana	mitochondrion	70.41	71.13
Zm00001d019958_P001	Maize	mitochondrion	53.06	70.27
GSMUA_AchrUn_...	Banana	mitochondrion	69.39	70.1
Bra026789.1-P	Field mustard	mitochondrion	66.33	66.33
CDY52023	Canola	mitochondrion	65.31	65.31
AT1G14980.1	Thale cress	mitochondrion	65.31	65.31
CDY39593	Canola	mitochondrion	65.31	65.31
CDY33726	Canola	mitochondrion	65.31	65.31
CDX83998	Canola	mitochondrion	65.31	65.31
CDX81688	Canola	mitochondrion	65.31	65.31
Bra016677.1-P	Field mustard	mitochondrion	65.31	65.31
CDY36520	Canola	mitochondrion	64.29	64.29
HORVU2Hr1G025930.4	Barley	cytosol	69.39	54.84
OQU81064	Sorghum	mitochondrion	39.8	51.32
KXG24557	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	36.73	48.65
OQU88508	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	36.73	48.65
Bra026173.1-P	Field mustard	mitochondrion	58.16	41.61
OQU91489	Sorghum	cytosol	32.65	39.51

Protein Annotations

MapMan:19.1.7.3	Gene3D:2.30.33.40	EntrezGene:8064446	UniProt:C5X3E1	InterPro:Chaperonin_GroES	InterPro:Chaperonin_GroES_sf
EnsemblPlants:EER97627	ProteinID:EER97627	ProteinID:EER97627.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0006457	GO:GO:0006950	GO:GO:0006986	GO:GO:0008150	GO:GO:0009987	GO:GO:0046872
GO:GO:0051082	GO:GO:0051085	GO:GO:0051087	InterPro:GroES-like_sf	InterPro:IPR037124	PFAM:PF00166
PRINTS:PR00297	PANTHER:PTHR10772	PANTHER:PTHR10772:SF12	SMART:SM00883	EnsemblPlantsGene:SORBI_3002G393400	SUPFAM:SSF50129
unigene:Sbi.18671	UniParc:UPI00017B6719	RefSeq:XP_002461106.1	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:74615367..74617313

Molecular Weight (calculated)

10544.0 Da

IEP (calculated)

8.986

GRAVY (calculated)

-0.032

Length

98 amino acids

Sequence
(BLAST)

1: MAKRLLPSLN RVLVEKLVQP KKTAGGILLP ETSKQLNAAK VVAVGPGERD KAGNLIPVAL KEGDTVLLPE YGGTEVKLAA DKEYLLFREH DILGTLVD

Best Arabidopsis Sequence Match ( AT1G23100.1 )
(BLAST)

1: MAKRLIPTLN RVLVEKILPP SKTVSGILLP EKSSQLNSGR VIAVGPGARD RAGNLIPVSV KEGDNVLLPE FGGTQVKLGE KEFLLYRDED IMATLHE

Arabidopsis Description

GroES-like family protein [Source:UniProtKB/TrEMBL;Acc:Q8LDC9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.