Factsheet for Os07t0641700-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867
extracellular: 24083427

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97627	Sorghum	mitochondrion	90.82	90.82
Zm00001d022307_P003	Maize	mitochondrion	90.82	89.9
Zm00001d007031_P002	Maize	mitochondrion	89.8	88.89
Os03t0366000-01	Rice	mitochondrion	84.69	84.69
TraesCS2D01G150600.1	Wheat	mitochondrion	84.69	83.0
TraesCS2B01G171400.1	Wheat	mitochondrion	84.69	83.0
TraesCS2A01G146000.1	Wheat	mitochondrion	84.69	83.0
GSMUA_AchrUn_...	Banana	mitochondrion	74.49	75.26
KRH66747	Soybean	cytosol, mitochondrion	74.49	75.26
KRG95075	Soybean	mitochondrion	74.49	75.26
GSMUA_Achr8P21710_001	Banana	mitochondrion	74.49	75.26
VIT_06s0009g02550.t01	Wine grape	cytosol, mitochondrion	72.45	73.2
GSMUA_Achr4P10770_001	Banana	mitochondrion	68.37	69.07
AT1G14980.1	Thale cress	mitochondrion	68.37	68.37
CDY39593	Canola	mitochondrion	68.37	68.37
CDY52023	Canola	mitochondrion	67.35	67.35
CDY36520	Canola	mitochondrion	67.35	67.35
CDY33726	Canola	mitochondrion	67.35	67.35
CDX83998	Canola	mitochondrion	67.35	67.35
Bra016677.1-P	Field mustard	mitochondrion	67.35	67.35
Bra026789.1-P	Field mustard	mitochondrion	66.33	66.33
CDX81688	Canola	mitochondrion	65.31	65.31
Zm00001d019958_P001	Maize	mitochondrion	47.96	63.51
HORVU2Hr1G025930.4	Barley	cytosol	77.55	61.29
KRH65868	Soybean	mitochondrion	54.08	57.61
KRH55636	Soybean	cytosol, mitochondrion, nucleus	48.98	52.75
Bra026173.1-P	Field mustard	mitochondrion	61.22	43.8

Protein Annotations

MapMan:19.1.7.3	Gene3D:2.30.33.40	EntrezGene:4344071	EMBL:AK122129	ProteinID:BAC79974.1	ProteinID:BAF22345.1
ProteinID:BAT02863.1	ProteinID:BAT02864.1	InterPro:Chaperonin_GroES	InterPro:Chaperonin_GroES_sf	ProteinID:EAZ40834.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005759	GO:GO:0006457	GO:GO:0006950	GO:GO:0006986	GO:GO:0008150
GO:GO:0009987	GO:GO:0046872	GO:GO:0051082	GO:GO:0051085	GO:GO:0051087	InterPro:GroES-like_sf
InterPro:IPR037124	EnsemblPlantsGene:Os07g0641700	EnsemblPlants:Os07t0641700-01	PFAM:PF00166	PRINTS:PR00297	PANTHER:PTHR10772
PANTHER:PTHR10772:SF12	UniProt:Q8H3I7	SMART:SM00883	SUPFAM:SSF50129	UniParc:UPI00001B3ACD	RefSeq:XP_015647372.1

Description

Similar to 10 kDa chaperonin (Protein CPN10) (Protein groES). (Os07t0641700-01);Similar to 10 kDa chaperonin. (Os07t0641700-02)

Coordinates

chr7:+:26705903..26707842

Molecular Weight (calculated)

10644.2 Da

IEP (calculated)

8.985

GRAVY (calculated)

-0.093

Length

98 amino acids

Sequence
(BLAST)

1: MARRLIPSLN RVLVEKLVQP KKSAGGILLP ETSKQLNSGK VVAVGPGERD KDGKLIPVAL KEGDTVLLPE YGGLEVKLAA EKEYLLFREH DILGTLVD

Best Arabidopsis Sequence Match ( AT1G14980.1 )
(BLAST)

1: MMKRLIPTFN RILVQRVIQP AKTESGILLP EKSSKLNSGK VIAVGPGSRD KDGKLIPVSV KEGDTVLLPE YGGTQVKLGE NEYHLFRDED VLGTLHED

Arabidopsis Description

CPN1010 kDa chaperonin, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34893]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.