CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66747	Soybean	cytosol, mitochondrion	76.09	72.16
KRG95075	Soybean	mitochondrion	73.91	70.1
GSMUA_Achr8P21710_001	Banana	mitochondrion	64.13	60.82
GSMUA_Achr4P10770_001	Banana	mitochondrion	64.13	60.82
KRH50384	Soybean	mitochondrion	61.96	58.76
GSMUA_AchrUn_...	Banana	mitochondrion	60.87	57.73
KRH55636	Soybean	cytosol, mitochondrion, nucleus	56.52	57.14
VIT_06s0009g02550.t01	Wine grape	cytosol, mitochondrion	59.78	56.7
Bra016677.1-P	Field mustard	mitochondrion	57.61	54.08
Os07t0641700-01	Rice	mitochondrion	57.61	54.08
CDY39593	Canola	mitochondrion	57.61	54.08
CDY52023	Canola	mitochondrion	57.61	54.08
CDY33726	Canola	mitochondrion	57.61	54.08
CDX83998	Canola	mitochondrion	57.61	54.08
Bra026789.1-P	Field mustard	mitochondrion	57.61	54.08
AT1G14980.1	Thale cress	mitochondrion	57.61	54.08
Zm00001d022307_P003	Maize	mitochondrion	57.61	53.54
CDY36520	Canola	mitochondrion	56.52	53.06
CDX81688	Canola	mitochondrion	56.52	53.06
TraesCS2D01G150600.1	Wheat	mitochondrion	57.61	53.0
TraesCS2B01G171400.1	Wheat	mitochondrion	57.61	53.0
TraesCS2A01G146000.1	Wheat	mitochondrion	57.61	53.0
Zm00001d007031_P002	Maize	mitochondrion	56.52	52.53
Zm00001d029263_P001	Maize	mitochondrion	53.26	50.52
Os03t0366000-01	Rice	mitochondrion	52.17	48.98
KRG89335	Soybean	endoplasmic reticulum, mitochondrion	61.96	46.72
OQU88508	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	34.78	43.24
KXG24557	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	34.78	43.24
OQU81064	Sorghum	mitochondrion	34.78	42.11
HORVU2Hr1G025930.4	Barley	cytosol	56.52	41.94
Zm00001d019958_P001	Maize	mitochondrion	31.52	39.19
OQU91489	Sorghum	cytosol	33.7	38.27
Bra026173.1-P	Field mustard	mitochondrion	55.43	37.23

Protein Annotations

MapMan:19.1.7.3	Gene3D:2.30.33.40	UniProt:A0A0R0KFM2	EMBL:ACUP02001700	InterPro:Chaperonin_GroES	InterPro:Chaperonin_GroES_sf
EnsemblPlantsGene:GLYMA_03G067300	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	InterPro:GroES-like_sf	InterPro:IPR037124	EnsemblPlants:KRH65868	ProteinID:KRH65868
ProteinID:KRH65868.1	PFAM:PF00166	PRINTS:PR00297	PANTHER:PTHR10772	PANTHER:PTHR10772:SF8	SMART:SM00883
SUPFAM:SSF50129	UniParc:UPI0006EDE934	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:13640027..13642131

Molecular Weight (calculated)

10065.5 Da

IEP (calculated)

10.077

GRAVY (calculated)

0.210

Length

92 amino acids

Sequence
(BLAST)

1: MSSITARIFN RVLVEKIVPS SKTNAGILLP GKSSKLNFGK VIAVGPGFHS KNGKLIPMAV KEGDTVLLPE YGGTEVKLDN KEYVFFMICF IY

Best Arabidopsis Sequence Match ( AT1G14980.1 )
(BLAST)

1: MMKRLIPTFN RILVQRVIQP AKTESGILLP EKSSKLNSGK VIAVGPGSRD KDGKLIPVSV KEGDTVLLPE YGGTQVKLGE NEYHLFRDED VLGTLHED

Arabidopsis Description

CPN1010 kDa chaperonin, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34893]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.