CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95075	Soybean	mitochondrion	97.94	97.94
GSMUA_Achr8P21710_001	Banana	mitochondrion	86.6	86.6
GSMUA_Achr4P10770_001	Banana	mitochondrion	82.47	82.47
VIT_06s0009g02550.t01	Wine grape	cytosol, mitochondrion	81.44	81.44
KRH50384	Soybean	mitochondrion	81.44	81.44
GSMUA_AchrUn_...	Banana	mitochondrion	80.41	80.41
AT1G14980.1	Thale cress	mitochondrion	77.32	76.53
CDY39593	Canola	mitochondrion	77.32	76.53
KRH65868	Soybean	mitochondrion	72.16	76.09
Bra016677.1-P	Field mustard	mitochondrion	76.29	75.51
CDY36520	Canola	mitochondrion	76.29	75.51
CDY52023	Canola	mitochondrion	76.29	75.51
CDX83998	Canola	mitochondrion	76.29	75.51
CDY33726	Canola	mitochondrion	75.26	74.49
Bra026789.1-P	Field mustard	mitochondrion	75.26	74.49
Os07t0641700-01	Rice	mitochondrion	75.26	74.49
CDX81688	Canola	mitochondrion	74.23	73.47
Zm00001d022307_P003	Maize	mitochondrion	73.2	71.72
Zm00001d007031_P002	Maize	mitochondrion	73.2	71.72
TraesCS2D01G150600.1	Wheat	mitochondrion	73.2	71.0
TraesCS2B01G171400.1	Wheat	mitochondrion	73.2	71.0
TraesCS2A01G146000.1	Wheat	mitochondrion	73.2	71.0
Zm00001d029263_P001	Maize	mitochondrion	69.07	69.07
Os03t0366000-01	Rice	mitochondrion	67.01	66.33
KRG89335	Soybean	endoplasmic reticulum, mitochondrion	81.44	64.75
KRH55636	Soybean	cytosol, mitochondrion, nucleus	54.64	58.24
OQU81064	Sorghum	mitochondrion	38.14	48.68
Zm00001d019958_P001	Maize	mitochondrion	37.11	48.65
HORVU2Hr1G025930.4	Barley	cytosol	61.86	48.39
Bra026173.1-P	Field mustard	mitochondrion	65.98	46.72
OQU88508	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	35.05	45.95
KXG24557	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	35.05	45.95
OQU91489	Sorghum	cytosol	37.11	44.44

Protein Annotations

EntrezGene:100306384	MapMan:19.1.7.3	Gene3D:2.30.33.40	EMBL:ACUP02002008	EMBL:BT090453	UniProt:C6SZ55
InterPro:Chaperonin_GroES	InterPro:Chaperonin_GroES_sf	EnsemblPlantsGene:GLYMA_03G125800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0006457	GO:GO:0006950	GO:GO:0006986	GO:GO:0008150	GO:GO:0009987	GO:GO:0046872
GO:GO:0051082	GO:GO:0051085	GO:GO:0051087	InterPro:GroES-like_sf	InterPro:IPR037124	EnsemblPlants:KRH66747
ProteinID:KRH66747	ProteinID:KRH66747.1	HAMAP:MF_00580	PFAM:PF00166	PRINTS:PR00297	PANTHER:PTHR10772
PANTHER:PTHR10772:SF8	SMART:SM00883	SUPFAM:SSF50129	UniParc:UPI0001B14E65	:	:

Description

hypothetical protein

Coordinates

chr3:-:33939483..33941884

Molecular Weight (calculated)

10604.0 Da

IEP (calculated)

8.979

GRAVY (calculated)

-0.186

Length

97 amino acids

Sequence
(BLAST)

1: MAKRLIPLFN RVLVEKIVPP SKTNAGILLP EKSSKLNSGK VIAVGPGFHS KDGKLIPVAV KEGDTVLLPE YGGTEVKLDN KEYHLFRDDD ILGTLHD

Best Arabidopsis Sequence Match ( AT1G14980.1 )
(BLAST)

1: MMKRLIPTFN RILVQRVIQP AKTESGILLP EKSSKLNSGK VIAVGPGSRD KDGKLIPVSV KEGDTVLLPE YGGTQVKLGE NEYHLFRDED VLGTLHED

Arabidopsis Description

CPN1010 kDa chaperonin, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34893]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.