CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026789.1-P	Field mustard	mitochondrion	98.98	98.98
CDY33726	Canola	mitochondrion	96.94	96.94
CDX83998	Canola	mitochondrion	95.92	95.92
CDY52023	Canola	mitochondrion	95.92	95.92
CDY39593	Canola	mitochondrion	94.9	94.9
AT1G14980.1	Thale cress	mitochondrion	94.9	94.9
CDY36520	Canola	mitochondrion	93.88	93.88
VIT_06s0009g02550.t01	Wine grape	cytosol, mitochondrion	74.49	75.26
KRH66747	Soybean	cytosol, mitochondrion	73.47	74.23
GSMUA_Achr8P21710_001	Banana	mitochondrion	72.45	73.2
KRG95075	Soybean	mitochondrion	72.45	73.2
CDY04743	Canola	mitochondrion	69.39	70.1
GSMUA_Achr4P10770_001	Banana	mitochondrion	68.37	69.07
GSMUA_AchrUn_...	Banana	mitochondrion	68.37	69.07
CDY21417	Canola	mitochondrion, plastid	68.37	69.07
TraesCS2A01G146000.1	Wheat	mitochondrion	68.37	67.0
TraesCS2B01G171400.1	Wheat	mitochondrion	68.37	67.0
TraesCS2D01G150600.1	Wheat	mitochondrion	68.37	67.0
EER97627	Sorghum	mitochondrion	65.31	65.31
Os07t0641700-01	Rice	mitochondrion	65.31	65.31
EER92223	Sorghum	mitochondrion	64.29	64.95
Zm00001d022307_P003	Maize	mitochondrion	65.31	64.65
Os03t0366000-01	Rice	mitochondrion	64.29	64.29
Zm00001d029263_P001	Maize	mitochondrion	63.27	63.92
Zm00001d007031_P002	Maize	mitochondrion	64.29	63.64
KRH65868	Soybean	mitochondrion	53.06	56.52
KRH55636	Soybean	cytosol, mitochondrion, nucleus	45.92	49.45
Zm00001d019958_P001	Maize	mitochondrion	34.69	45.95
HORVU2Hr1G025930.4	Barley	cytosol	56.12	44.35

Protein Annotations

MapMan:19.1.7.3	Gene3D:2.30.33.40	GO:A0A078D305	EnsemblPlants:CDX81688	ProteinID:CDX81688	ProteinID:CDX81688.1
InterPro:Chaperonin_GroES	InterPro:Chaperonin_GroES_sf	InterPro:Chaprnonin_Cpn10_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005507	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00136611001	InterPro:GroES-like_sf	InterPro:IPR037124	PFAM:PF00166	PRINTS:PR00297
ScanProsite:PS00681	PANTHER:PTHR10772	PANTHER:PTHR10772:SF25	SMART:SM00883	SUPFAM:SSF50129	UniParc:UPI0004EEFDF9

Description

BnaC08g39130D

Coordinates

chrLK031826:-:373242..374057

Molecular Weight (calculated)

10728.0 Da

IEP (calculated)

7.690

GRAVY (calculated)

-0.307

Length

98 amino acids

Sequence
(BLAST)

1: MMKRLVPTFN RILVKRVIQP AKTESGILLP EKASSLNSGK VIAVGPGSRD KDGKLIPVSV KEGDTVLLPE YGGTQVKLGD NEYHLFRDED VLGTLHED

Best Arabidopsis Sequence Match ( AT1G14980.1 )
(BLAST)

1: MMKRLIPTFN RILVQRVIQP AKTESGILLP EKSSKLNSGK VIAVGPGSRD KDGKLIPVSV KEGDTVLLPE YGGTQVKLGE NEYHLFRDED VLGTLHED

Arabidopsis Description

CPN1010 kDa chaperonin, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34893]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.