CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 7
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029263_P001	Maize	mitochondrion	93.81	93.81
Os03t0366000-01	Rice	mitochondrion	86.6	85.71
EER97627	Sorghum	mitochondrion	82.47	81.63
GSMUA_AchrUn_...	Banana	mitochondrion	73.2	73.2
GSMUA_Achr8P21710_001	Banana	mitochondrion	72.16	72.16
VIT_06s0009g02550.t01	Wine grape	cytosol, mitochondrion	70.1	70.1
CDY36520	Canola	mitochondrion	68.04	67.35
CDY39593	Canola	mitochondrion	68.04	67.35
Bra016677.1-P	Field mustard	mitochondrion	67.01	66.33
AT1G14980.1	Thale cress	mitochondrion	67.01	66.33
CDY52023	Canola	mitochondrion	67.01	66.33
CDY33726	Canola	mitochondrion	67.01	66.33
CDX83998	Canola	mitochondrion	67.01	66.33
GSMUA_Achr4P10770_001	Banana	mitochondrion	64.95	64.95
CDX81688	Canola	mitochondrion	64.95	64.29
Bra026789.1-P	Field mustard	mitochondrion	64.95	64.29
OQU81064	Sorghum	mitochondrion	47.42	60.53
KXG24557	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	42.27	55.41
OQU88508	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	42.27	55.41
OQU91489	Sorghum	cytosol	39.18	46.91
Bra026173.1-P	Field mustard	mitochondrion	60.82	43.07

Protein Annotations

MapMan:19.1.7.3	Gene3D:2.30.33.40	EntrezGene:8080784	UniProt:C5WYR5	InterPro:Chaperonin_GroES	InterPro:Chaperonin_GroES_sf
EnsemblPlants:EER92223	ProteinID:EER92223	ProteinID:EER92223.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0006457	GO:GO:0006950	GO:GO:0006986	GO:GO:0008150	GO:GO:0009987	GO:GO:0046872
GO:GO:0051082	GO:GO:0051085	GO:GO:0051087	InterPro:GroES-like_sf	InterPro:IPR037124	PFAM:PF00166
PRINTS:PR00297	PANTHER:PTHR10772	PANTHER:PTHR10772:SF12	SMART:SM00883	EnsemblPlantsGene:SORBI_3001G361600	SUPFAM:SSF50129
UniParc:UPI0001A821EA	RefSeq:XP_002465225.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:65125966..65129004

Molecular Weight (calculated)

10674.1 Da

IEP (calculated)

5.909

GRAVY (calculated)

-0.215

Length

97 amino acids

Sequence
(BLAST)

1: MAKRLIPSLN RVLVEKLLQP KKSVGGILLP ETTKQLNAAN VIAVGPGDRD RDGKLIPVSL NEGDTVLLPE YGGTEVKLAE KEYLLFREHD ILGKLEE

Best Arabidopsis Sequence Match ( AT1G23100.1 )
(BLAST)

1: MAKRLIPTLN RVLVEKILPP SKTVSGILLP EKSSQLNSGR VIAVGPGARD RAGNLIPVSV KEGDNVLLPE FGGTQVKLGE KEFLLYRDED IMATLHE

Arabidopsis Description

GroES-like family protein [Source:UniProtKB/TrEMBL;Acc:Q8LDC9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.