Factsheet for GSMUA_Achr8P21710_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 7
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	mitochondrion	90.72	90.72
KRG95075	Soybean	mitochondrion	87.63	87.63
VIT_06s0009g02550.t01	Wine grape	cytosol, mitochondrion	86.6	86.6
KRH66747	Soybean	cytosol, mitochondrion	86.6	86.6
GSMUA_Achr4P10770_001	Banana	mitochondrion	86.6	86.6
CDY39593	Canola	mitochondrion	77.32	76.53
Bra016677.1-P	Field mustard	mitochondrion	76.29	75.51
AT1G14980.1	Thale cress	mitochondrion	76.29	75.51
CDX83998	Canola	mitochondrion	76.29	75.51
CDY36520	Canola	mitochondrion	76.29	75.51
CDY52023	Canola	mitochondrion	76.29	75.51
Zm00001d029263_P001	Maize	mitochondrion	75.26	75.26
CDY33726	Canola	mitochondrion	75.26	74.49
Os07t0641700-01	Rice	mitochondrion	75.26	74.49
Bra026789.1-P	Field mustard	mitochondrion	73.2	72.45
Os03t0366000-01	Rice	mitochondrion	73.2	72.45
CDX81688	Canola	mitochondrion	73.2	72.45
EER92223	Sorghum	mitochondrion	72.16	72.16
EER97627	Sorghum	mitochondrion	72.16	71.43
Zm00001d007031_P002	Maize	mitochondrion	72.16	70.71
Zm00001d022307_P003	Maize	mitochondrion	72.16	70.71
TraesCS2A01G146000.1	Wheat	mitochondrion	72.16	70.0
TraesCS2B01G171400.1	Wheat	mitochondrion	72.16	70.0
TraesCS2D01G150600.1	Wheat	mitochondrion	72.16	70.0
KRH65868	Soybean	mitochondrion	60.82	64.13
OQU81064	Sorghum	mitochondrion	42.27	53.95
Zm00001d019958_P001	Maize	mitochondrion	39.18	51.35
KXG24557	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	38.14	50.0
OQU88508	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	38.14	50.0
KRH55636	Soybean	cytosol, mitochondrion, nucleus	46.39	49.45
HORVU2Hr1G025930.4	Barley	cytosol	62.89	49.19
Bra026173.1-P	Field mustard	mitochondrion	68.04	48.18
OQU91489	Sorghum	cytosol	37.11	44.44

Protein Annotations

MapMan:19.1.7.3	Gene3D:2.30.33.40	InterPro:Chaperonin_GroES	InterPro:Chaperonin_GroES_sf	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G21710_001
EnsemblPlants:GSMUA_Achr8P21710_001	EnsemblPlants:GSMUA_Achr8T21710_001	InterPro:GroES-like_sf	InterPro:IPR037124	UniProt:M0TSH4	HAMAP:MF_00580
PFAM:PF00166	PRINTS:PR00297	PANTHER:PTHR10772	PANTHER:PTHR10772:SF25	SMART:SM00883	SUPFAM:SSF50129
UniParc:UPI000294E998	:	:	:	:	:

Description

10 kDa chaperonin [Source:GMGC_GENE;Acc:GSMUA_Achr8G21710_001]

Coordinates

chr8:+:26518390..26522037

Molecular Weight (calculated)

10544.9 Da

IEP (calculated)

8.461

GRAVY (calculated)

-0.195

Length

97 amino acids

Sequence
(BLAST)

1: MAKRLIPLFN RVLVEKIVPP SKTSAGILLP EKTTKLNSGK VVAVGPGARD RDGKLIPVSV KEGDTVLLPE YGGTEVKLGE KEYHLYRDDD ILGTLCD

Best Arabidopsis Sequence Match ( AT1G14980.1 )
(BLAST)

1: MMKRLIPTFN RILVQRVIQP AKTESGILLP EKSSKLNSGK VIAVGPGSRD KDGKLIPVSV KEGDTVLLPE YGGTQVKLGE NEYHLFRDED VLGTLHED

Arabidopsis Description

CPN1010 kDa chaperonin, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34893]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.