CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65868	Soybean	mitochondrion	57.14	56.52
KRH66747	Soybean	cytosol, mitochondrion	58.24	54.64
KRG95075	Soybean	mitochondrion	58.24	54.64
Os07t0641700-01	Rice	mitochondrion	52.75	48.98
GSMUA_Achr4P10770_001	Banana	mitochondrion	51.65	48.45
CDY39593	Canola	mitochondrion	51.65	47.96
TraesCS2A01G146000.1	Wheat	mitochondrion	51.65	47.0
TraesCS2B01G171400.1	Wheat	mitochondrion	51.65	47.0
TraesCS2D01G150600.1	Wheat	mitochondrion	51.65	47.0
Bra016677.1-P	Field mustard	mitochondrion	50.55	46.94
CDY52023	Canola	mitochondrion	50.55	46.94
CDY36520	Canola	mitochondrion	50.55	46.94
CDY33726	Canola	mitochondrion	50.55	46.94
CDX83998	Canola	mitochondrion	50.55	46.94
AT1G14980.1	Thale cress	mitochondrion	50.55	46.94
Zm00001d022307_P003	Maize	mitochondrion	50.55	46.46
GSMUA_Achr8P21710_001	Banana	mitochondrion	49.45	46.39
OQU81064	Sorghum	mitochondrion	38.46	46.05
CDX81688	Canola	mitochondrion	49.45	45.92
Bra026789.1-P	Field mustard	mitochondrion	49.45	45.92
Os03t0366000-01	Rice	mitochondrion	49.45	45.92
Zm00001d007031_P002	Maize	mitochondrion	49.45	45.45
GSMUA_AchrUn_...	Banana	mitochondrion	48.35	45.36
KXG24557	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	36.26	44.59
OQU88508	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	36.26	44.59
Zm00001d029263_P001	Maize	mitochondrion	47.25	44.33
KRH50384	Soybean	mitochondrion	46.15	43.3
VIT_06s0009g02550.t01	Wine grape	cytosol, mitochondrion	45.05	42.27
KRG89335	Soybean	endoplasmic reticulum, mitochondrion	48.35	36.07
HORVU2Hr1G025930.4	Barley	cytosol	48.35	35.48
OQU91489	Sorghum	cytosol	30.77	34.57
Bra026173.1-P	Field mustard	mitochondrion	46.15	30.66
Zm00001d019958_P001	Maize	mitochondrion	23.08	28.38

Protein Annotations

MapMan:19.1.7.3	Gene3D:2.30.33.40	UniProt:A0A0R0JW03	EMBL:ACUP02004031	InterPro:Chaperonin_GroES	InterPro:Chaperonin_GroES_sf
EnsemblPlantsGene:GLYMA_06G268300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006457	GO:GO:0006950
GO:GO:0006986	GO:GO:0008150	GO:GO:0009987	GO:GO:0046872	GO:GO:0051082	GO:GO:0051085
GO:GO:0051087	InterPro:GroES-like_sf	InterPro:IPR037124	EnsemblPlants:KRH55636	ProteinID:KRH55636	ProteinID:KRH55636.1
PFAM:PF00166	PANTHER:PTHR10772	PANTHER:PTHR10772:SF8	SMART:SM00883	SUPFAM:SSF50129	UniParc:UPI0006EDAAAF

Description

hypothetical protein

Coordinates

chr6:+:45677491..45683311

Molecular Weight (calculated)

10320.8 Da

IEP (calculated)

10.037

GRAVY (calculated)

-0.263

Length

91 amino acids

Sequence
(BLAST)

1: MMLFKIKVKR AITEELKQSK ILAYVTALKK LCNHPKLNSE KVIAVGPGFH SKNGKLIPVA VKEGDTVLLP EYGGTEVKLD NKEYWKDFLN Y

Best Arabidopsis Sequence Match ( AT1G14980.1 )
(BLAST)

1: MMKRLIPTFN RILVQRVIQP AKTESGILLP EKSSKLNSGK VIAVGPGSRD KDGKLIPVSV KEGDTVLLPE YGGTQVKLGE NEYHLFRDED VLGTLHED

Arabidopsis Description

CPN1010 kDa chaperonin, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34893]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.