Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG98507 | Soybean | nucleus | 65.95 | 66.39 |
| KRG98502 | Soybean | nucleus | 61.62 | 62.47 |
| KRH46364 | Soybean | nucleus | 67.03 | 61.46 |
| VIT_19s0015g00430.t01 | Wine grape | nucleus | 41.35 | 51.09 |
| PGSC0003DMT400037344 | Potato | endoplasmic reticulum, vacuole | 21.62 | 45.98 |
| CDX94304 | Canola | nucleus | 26.49 | 44.85 |
| Solyc07g065490.2.1 | Tomato | nucleus | 37.43 | 43.69 |
| Solyc10g006000.2.1 | Tomato | nucleus | 30.0 | 40.07 |
| PGSC0003DMT400057390 | Potato | extracellular, nucleus | 36.62 | 39.68 |
| CDY06563 | Canola | nucleus | 36.62 | 39.45 |
| CDX89318 | Canola | nucleus | 35.0 | 36.79 |
| AT4G26630.1 | Thale cress | nucleus | 37.57 | 36.44 |
| AT5G55660.1 | Thale cress | nucleus | 37.43 | 35.6 |
| Bra035582.1-P | Field mustard | nucleus | 37.7 | 35.14 |
| Bra026415.1-P | Field mustard | nucleus | 39.19 | 34.73 |
| KRH41110 | Soybean | nucleus | 22.3 | 33.88 |
| CDY20754 | Canola | nucleus | 36.35 | 33.88 |
| CDY28645 | Canola | nucleus | 36.22 | 33.8 |
| KRH59791 | Soybean | nucleus | 23.65 | 33.27 |
| KRH63796 | Soybean | nucleus | 23.92 | 33.08 |
| CDY17352 | Canola | extracellular, vacuole | 36.49 | 32.61 |
| KRH54152 | Soybean | nucleus | 24.05 | 32.42 |
| Bra002880.1-P | Field mustard | endoplasmic reticulum | 37.7 | 32.25 |
| Zm00001d013757_P010 | Maize | nucleus | 26.89 | 30.47 |
| GSMUA_Achr9P09250_001 | Banana | endoplasmic reticulum, golgi | 13.11 | 30.22 |
| Os03t0596900-01 | Rice | nucleus | 28.24 | 29.73 |
| EER91265 | Sorghum | nucleus | 25.68 | 29.46 |
| Zm00001d033159_P001 | Maize | nucleus | 17.3 | 28.64 |
| Bra010432.1-P | Field mustard | nucleus | 34.46 | 22.55 |
| CDX97358 | Canola | nucleus | 35.95 | 21.93 |
| TraesCS4B01G148100.1 | Wheat | nucleus | 27.57 | 20.99 |
| TraesCS4A01G137900.1 | Wheat | nucleus | 27.16 | 20.55 |
| HORVU4Hr1G035250.1 | Barley | nucleus | 27.03 | 20.18 |
| TraesCS4D01G153300.1 | Wheat | nucleus | 27.03 | 19.96 |
| OQU91413 | Sorghum | nucleus | 23.92 | 13.1 |
Protein Annotations
| EMBL:ACUP02005340 | EnsemblPlants:KRH46360 | EnsemblPlantsGene:GLYMA_08G329100 | EntrezGene:100812631 | Gene3D:1.10.10.60 | InterPro:DEK_C |
| ncoils:Coil | PANTHER:PTHR13468 | PANTHER:PTHR13468:SF8 | PFAM:PF08766 | ProteinID:KRH46360 | ProteinID:KRH46360.1 |
| SEG:seg | SUPFAM:SSF109715 | UniParc:UPI0006EDE420 | UniProt:A0A0R0J1S6 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr8:+:44680276..44689930
Molecular Weight (calculated)
83722.0 Da
IEP (calculated)
4.788
GRAVY (calculated)
-1.395
Length
740 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEEPANEV SKIDSDEKSL QENTLDEITE KKDLETDGGK VLENNGIKEL KENIVKEIED KQADSMEKVE ESKKVDVVEE AKEDKKEDGV EEAKEDKKDG
101: VEEVNKDMKE DGVGEVKEDK EVDGVEVKEG KEVDGVKEVK EDTEIDGVKE VKEDKEVGGV SGVKEVEEDK EVDGVKKVED KKGDELKEIE EDKKDDHISE
201: NDKMDEDTEV KETIEGKQEN EKVQAEKPEV DAMEVEGGIQ EEESDEKEKK DVAMEEDEDE DKDNIDKSKE EEKTEDSKGK KGSKKRGRGK IDGEKVKEKR
301: KEPKKTEPRT PTIDRPVRER KSVERLVASI DKDATKEFHI EKGRGTPLKN IPNVAFKLSR RKTDDTFKLL HTILFGRRGK AVEIKSNILR FSGFVWRDNE
401: EKQMIKVKEK LDKCNKEKLL EFCDVLDITI NKATSRKEDI IAKLIDFLVA PHATTTVLLA EKEKPSKGTK RKRVVKWGSS RSGTTSRRSV KSQKKNEDST
501: VVRRKSASDT DESEEDKKDE ENEENENGVA DKSEDETPEK SESEDKSDSG SESEDIKEKK KHSKTSSTKK ESAKKSKIEK IAVPNKSRSP PKRAPKKPSF
601: NLSKSDEDSD ESPKVFSRKK KNEKGGKQKT STPTKSASEE KTEKVTRGKG KKKEKSRPSD NQLRDAICEI LKEVDFNTAT FTDILKKLAK QFDMDLTPRK
701: ASIKFMIQEE LTKLADEAND DGEEDAEKDE APSTGQEVEA
101: VEEVNKDMKE DGVGEVKEDK EVDGVEVKEG KEVDGVKEVK EDTEIDGVKE VKEDKEVGGV SGVKEVEEDK EVDGVKKVED KKGDELKEIE EDKKDDHISE
201: NDKMDEDTEV KETIEGKQEN EKVQAEKPEV DAMEVEGGIQ EEESDEKEKK DVAMEEDEDE DKDNIDKSKE EEKTEDSKGK KGSKKRGRGK IDGEKVKEKR
301: KEPKKTEPRT PTIDRPVRER KSVERLVASI DKDATKEFHI EKGRGTPLKN IPNVAFKLSR RKTDDTFKLL HTILFGRRGK AVEIKSNILR FSGFVWRDNE
401: EKQMIKVKEK LDKCNKEKLL EFCDVLDITI NKATSRKEDI IAKLIDFLVA PHATTTVLLA EKEKPSKGTK RKRVVKWGSS RSGTTSRRSV KSQKKNEDST
501: VVRRKSASDT DESEEDKKDE ENEENENGVA DKSEDETPEK SESEDKSDSG SESEDIKEKK KHSKTSSTKK ESAKKSKIEK IAVPNKSRSP PKRAPKKPSF
601: NLSKSDEDSD ESPKVFSRKK KNEKGGKQKT STPTKSASEE KTEKVTRGKG KKKEKSRPSD NQLRDAICEI LKEVDFNTAT FTDILKKLAK QFDMDLTPRK
701: ASIKFMIQEE LTKLADEAND DGEEDAEKDE APSTGQEVEA
001: MGEEDTKVIV EPTANGTSSL QKTSDAISGK EVQENASGKE VQESKKEEDT GLEKMEIDDE GKQHEGESET GDKEVEVTEE EKKDVGEDKE QPEADKMDED
101: TDDKNLKADD GVSGVATEED AVMKESVESA DNKDAENPEG EQEKESKEEK LEGGKANGNE EGDTEEKLVG GDKGDDVDEA EKVENVDEDD KEEALKEKNE
201: AELAEEEETN KGEEVKEANK EDDVEADTKV AEPEVEDKKT ESKDENEDKE EEKEDEKEES MDDKEDEKEE SNDDDKEDEK EESNDDKEDK KEDIKKSNKR
301: GKGKTEKTRG KTKSDEEKKD IEPKTPFFSD RPVRERKSVE RLVAVVDKDS SREFHVEKGK GTPLKDIPNV AYKVSRKKSD EVFKQLHTIL FGGKRVKATQ
401: LKAHILRFSG YKWQGDEEKA KLKVKEKFEK INKEKLLEFC DLFDISVAKA TTKKEDIVTK LVEFLEKPHA TTDVLVNEKE KGVKRKRTPK KSSPAAGSSS
501: SKRSAKSQKK TEEATRTNKK SVAHSDDESE EEKEDDEEEE KEQEVEEEEE ENENGIPDKS EDEAPQLSES EENVESEEES EEETKKKKRG SRTSSDKKES
601: AGKSRSKKTA VPTKSSPPKK ATQKRSAGKR KKSDDDSDTS PKASSKRKKT EKPAKEQAAA PLKSVSKEKP VIGKRGGKGK DKNKEPSDEE LKTAIIDILK
701: GVDFNTATFT DILKRLDAKF NISLASKKSS IKRMIQDELT KLADEAEDEE GEEEDAEHEE EEEKEKAKGS GGGEEVKA
101: TDDKNLKADD GVSGVATEED AVMKESVESA DNKDAENPEG EQEKESKEEK LEGGKANGNE EGDTEEKLVG GDKGDDVDEA EKVENVDEDD KEEALKEKNE
201: AELAEEEETN KGEEVKEANK EDDVEADTKV AEPEVEDKKT ESKDENEDKE EEKEDEKEES MDDKEDEKEE SNDDDKEDEK EESNDDKEDK KEDIKKSNKR
301: GKGKTEKTRG KTKSDEEKKD IEPKTPFFSD RPVRERKSVE RLVAVVDKDS SREFHVEKGK GTPLKDIPNV AYKVSRKKSD EVFKQLHTIL FGGKRVKATQ
401: LKAHILRFSG YKWQGDEEKA KLKVKEKFEK INKEKLLEFC DLFDISVAKA TTKKEDIVTK LVEFLEKPHA TTDVLVNEKE KGVKRKRTPK KSSPAAGSSS
501: SKRSAKSQKK TEEATRTNKK SVAHSDDESE EEKEDDEEEE KEQEVEEEEE ENENGIPDKS EDEAPQLSES EENVESEEES EEETKKKKRG SRTSSDKKES
601: AGKSRSKKTA VPTKSSPPKK ATQKRSAGKR KKSDDDSDTS PKASSKRKKT EKPAKEQAAA PLKSVSKEKP VIGKRGGKGK DKNKEPSDEE LKTAIIDILK
701: GVDFNTATFT DILKRLDAKF NISLASKKSS IKRMIQDELT KLADEAEDEE GEEEDAEHEE EEEKEKAKGS GGGEEVKA
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:F4K4Y5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.