CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
cytosol 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73870	Soybean	plastid	93.36	94.69
PGSC0003DMT400076662	Potato	cytosol	47.48	80.82
Bra028970.1-P	Field mustard	plastid	63.18	63.82
AT5G55580.1	Thale cress	plastid	63.58	63.71
CDY66686	Canola	extracellular, vacuole	63.18	63.69
CDY36755	Canola	nucleus, vacuole	62.98	63.49
Solyc12g015640.1.1	Tomato	plastid	59.15	61.0
GSMUA_Achr3P29890_001	Banana	plastid	59.56	58.38
VIT_19s0090g01770.t01	Wine grape	plastid	57.14	56.46
EER97446	Sorghum	mitochondrion	56.54	55.53
Os07t0583200-01	Rice	endoplasmic reticulum, plastid	55.53	54.87
TraesCS2D01G198500.1	Wheat	plastid	51.91	54.78
HORVU2Hr1G036490.17	Barley	mitochondrion	54.73	54.08
TraesCS2B01G218100.1	Wheat	plastid	54.12	53.91
TraesCS2A01G189200.1	Wheat	plastid	53.72	53.51
Zm00001d006700_P003	Maize	mitochondrion, plastid	55.13	47.57
KRH40190	Soybean	cytosol	7.04	31.82
KRH74890	Soybean	cytosol, plasma membrane, plastid	13.48	25.28
KRH70749	Soybean	plastid	14.29	24.07
KRH43735	Soybean	plastid	15.9	23.37
KRH13722	Soybean	plastid	15.9	23.24
KRH12828	Soybean	plastid	13.88	22.85
KRH01028	Soybean	plastid	12.07	21.9
KRH37793	Soybean	plastid	14.08	21.74
KRH19886	Soybean	cytosol	14.49	21.49
KRH32500	Soybean	cytosol	14.29	21.19
KRH39012	Soybean	cytosol	16.3	18.12
KRG94311	Soybean	plastid	16.7	17.55
KRH57654	Soybean	mitochondrion, plastid	16.9	17.5
KRH72610	Soybean	plastid	16.7	16.02
KRH60420	Soybean	cytosol	12.88	15.69
KRH64303	Soybean	nucleus	15.29	15.26
KRH41721	Soybean	mitochondrion	14.69	14.63
KRH09594	Soybean	cytosol	17.1	14.36
KRH24469	Soybean	plastid	16.1	12.82
KRH29455	Soybean	mitochondrion	12.27	10.74

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:102660933	MapMan:15.6.2.2	EMBL:ACUP02008495	EnsemblPlantsGene:GLYMA_14G015800	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255
InterPro:IPR038538	UniProt:K7M4D9	EnsemblPlants:KRH14270	ProteinID:KRH14270	ProteinID:KRH14270.1	InterPro:MTERF
InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF13	SMART:SM00733	UniParc:UPI00029595AE
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:1139439..1141571

Molecular Weight (calculated)

57737.5 Da

IEP (calculated)

9.073

GRAVY (calculated)

-0.542

Length

497 amino acids

Sequence
(BLAST)

001: MAAVMPLYPY NPMLYFSTPS SFCSQFWILE RERLGSARLK NLVKLAAHSN PRILKSNRKS KYGEALSLYD SDEDDEELDD DDNEDDDDDW LSDEEFSEPA
101: NLDVNNKRFK SKTTKGNDRQ QEREWGLRSF DNEQSIRLPR SERVATLQRN ESGKLPNRDT LQHSRNVKDK KYPQLSEEIP LDVKWLPLLD YLSTFGMKES
201: HFVQMYERRM QSLQINVCSA QERLEYLLSI GVKQRDVRRI LLRQPQILEY TVENNLKSHV AFLRGLGIPN SRIGQIIAAA PSLFSYSVEN SLKPTVSYLI
301: EEVGIKEKDL GKVIQLSPQI LVQRIDISWN TRCMFLTKEL GAPRDSIVKM VTKHPQLLHY SIDDGLLPRI NFLRSIGMKN SDILKVLTSL TQVLSLSLEE
401: NLKPKYLYLV NELNNEVQSL TKYPMYLSLS LDQRIRPRHR FLVSLKKAPK GPFPLGSLVP TDECFCQQWA GTSLDKYLAF RQRLLLKKFA EKYERKM

Best Arabidopsis Sequence Match ( AT5G55580.1 )
(BLAST)

001: MAGFSLYCFK NPRILFTLPS ESPLFVLGSD KCSPATRRPS RKTRGFVVTY AHSNPKIINP KKKSRYGQTL SPYDSDEDDD DDDDDDDDDW LLNDDFAEVT
101: EYEKKKPKSH KQTIAKKSVK KGIVKPEESE TDEDDLDLGI SPNATSEKKK ESWRLDGRGK MSSRKYVEKL YPRLAEEIDI DPKCVPLLDY LSTFGLKESH
201: FVQMYERHMP SLQINVFSAQ ERLDYLLSVG VKHRDIKRML LRQPQILQYT VENNLKAHIS FLMGLGIPNS KIGQIVAATP SLFSYSVENS LRPTIRYLIE
301: EVGIKETDVG KVVQLSPQIL VQRLDITWNT RYMFLSKELG APRDSVVKMV KKHPQLLHYS IDDGFLPRIN FLRSIGMCNS DILKVLTSLT QVLSLSLEDN
401: LKPKYMYLVN ELNNEVHILT KYPMYLSLSL DQRIRPRHRF LVELKKVRKG PFPLSSLVPN DESFCQQWAG TSVDTYLAFR QRLLLKEFAN KYDKRG

Arabidopsis Description

MTERF9Transcription termination factor MTERF9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FM80]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.