CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01028	Soybean	plastid	88.18	35.4
CDX92284	Canola	plastid	65.45	26.18
CDX99300	Canola	plastid	64.55	25.82
Bra022367.1-P	Field mustard	plastid	63.64	25.45
PGSC0003DMT400001905	Potato	plastid	64.55	25.27
AT3G18870.1	Thale cress	plastid	62.73	25.18
Solyc01g109550.2.1	Tomato	mitochondrion	66.36	24.83
GSMUA_Achr2P08550_001	Banana	plastid	61.82	24.82
VIT_03s0063g02460.t01	Wine grape	plastid	61.82	24.64
KRH74890	Soybean	cytosol, plasma membrane, plastid	39.09	16.23
KRH70749	Soybean	plastid	39.09	14.58
KRH12828	Soybean	plastid	39.09	14.24
KRH43735	Soybean	plastid	41.82	13.61
KRH13722	Soybean	plastid	41.82	13.53
KRH37793	Soybean	plastid	38.18	13.04
KRH19886	Soybean	cytosol	29.09	9.55
KRH32500	Soybean	cytosol	29.09	9.55
KRH60420	Soybean	cytosol	30.0	8.09
KRH39012	Soybean	cytosol	29.09	7.16
KRH14270	Soybean	plastid	31.82	7.04
KRH41721	Soybean	mitochondrion	30.91	6.81
KRH73870	Soybean	plastid	30.0	6.73
KRH64303	Soybean	nucleus	30.0	6.63
KRG94311	Soybean	plastid	28.18	6.55
KRH57654	Soybean	mitochondrion, plastid	28.18	6.46
KRH72610	Soybean	plastid	28.18	5.98
KRH24469	Soybean	plastid	33.64	5.93
KRH09594	Soybean	cytosol	30.0	5.57
KRH29455	Soybean	mitochondrion	23.64	4.58

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	EMBL:ACUP02006028	EnsemblPlantsGene:GLYMA_09G244100	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009658
GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255	InterPro:IPR038538
UniProt:K7LFV0	EnsemblPlants:KRH40190	ProteinID:KRH40190	ProteinID:KRH40190.1	InterPro:MTERF	InterPro:MTERF_sf
PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF19	SMART:SM00733	UniParc:UPI0002960559	:

Description

hypothetical protein

Coordinates

chr9:+:46677649..46678654

Molecular Weight (calculated)

13421.6 Da

IEP (calculated)

10.229

GRAVY (calculated)

-0.376

Length

110 amino acids

Sequence
(BLAST)

001: MLNTRVDKLH TKVLFMQELG FLYEKALRAC ARLPAIFGYD VENNLWPKFV YLVKEMERDL EELNRFPQYF GFSLKERIVP RHLHLKERGV RIPLNRMLMW
101: GNEKFYAKWK

Best Arabidopsis Sequence Match ( AT3G18870.1 )
(BLAST)

001: MAVIASLHHL QPLSSFSSPP SPSSSKPLYL KFQTSHRENL RHLSSLGIVP QNPRLAPPAN DLSVILSAVN LLKSKGISDE DFPRLVFLCP QLFSPTFDIS
101: KLDPVFDFLT GELGASAEES RGLIVNCPNI LFSDVEYCLR PTLVYLKELG VRNLNRASKT NAHVLNTRVE KLRAKMRFLK SIGFEHEEAA RVCGRIPAIF
201: GYSVEDNLRP KFEFLVYDME RELEELKKFP QYFAFSLGKR IRPRHWHLKK KNVRVSLSRM LMWGDQKFYS KWKP

Arabidopsis Description

At3g18870 [Source:UniProtKB/TrEMBL;Acc:Q9LHN2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.