CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37793	Soybean	plastid	95.36	89.44
Solyc02g021430.1.1	Tomato	plastid	60.26	59.48
AT2G34620.1	Thale cress	plastid	58.94	58.75
PGSC0003DMT400080487	Potato	plastid	59.27	57.74
VIT_10s0003g04040.t01	Wine grape	plastid	64.9	55.68
CDX84297	Canola	plastid	60.26	55.15
GSMUA_Achr6P31220_001	Banana	plastid	37.42	50.22
Zm00001d011574_P001	Maize	cytosol, extracellular, plastid	24.5	48.37
Os03t0785200-01	Rice	plastid	49.34	48.06
OQU90879	Sorghum	plastid	50.66	47.96
TraesCS5A01G423600.1	Wheat	plastid	48.68	45.94
TraesCS5B01G425900.1	Wheat	plastid	49.01	45.12
TraesCS5D01G432100.1	Wheat	plastid	48.01	44.34
KRH74890	Soybean	cytosol, plasma membrane, plastid	35.43	40.38
KRH40190	Soybean	cytosol	14.24	39.09
KRH70749	Soybean	plastid	36.76	37.63
KRH13722	Soybean	plastid	35.76	31.76
KRH43735	Soybean	plastid	34.77	31.07
KRH01028	Soybean	plastid	28.15	31.02
KRH32500	Soybean	cytosol	18.87	17.01
KRH39012	Soybean	cytosol	25.17	17.0
KRH19886	Soybean	cytosol	18.54	16.72
KRH57654	Soybean	mitochondrion, plastid	26.16	16.46
KRG94311	Soybean	plastid	24.83	15.86
KRH60420	Soybean	cytosol	20.53	15.2
KRH73870	Soybean	plastid	22.85	14.08
KRH14270	Soybean	plastid	22.85	13.88
KRH41721	Soybean	mitochondrion	22.85	13.83
KRH64303	Soybean	nucleus	22.52	13.65
KRH24469	Soybean	plastid	26.82	12.98
KRH72610	Soybean	plastid	21.52	12.55
KRH09594	Soybean	cytosol	23.84	12.16
KRH29455	Soybean	mitochondrion	20.2	10.74

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:100801948	MapMan:15.6.2.2	EMBL:ACUP02009404	EnsemblPlantsGene:GLYMA_15G197200	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255
UniProt:I1MHW6	InterPro:IPR038538	EnsemblPlants:KRH12828	ProteinID:KRH12828	ProteinID:KRH12828.1	InterPro:MTERF
InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF78	SMART:SM00733	UniParc:UPI000233B187

Description

hypothetical protein

Coordinates

chr15:-:22901121..22902178

Molecular Weight (calculated)

33973.8 Da

IEP (calculated)

9.393

GRAVY (calculated)

-0.107

Length

302 amino acids

Sequence
(BLAST)

001: MPPAAGAVAL HSSLCNISSD KPSSPLRSPP IHVSPKPKSL FQNHPLYTPT HTKLSLEFKE KILCLEVMGV DAGKALSQNP DLRTATMESI HCIITFLLSK
101: GLQEKDLPRL FGMCPKILTS DIKTDLNPVF DFILNELKVP GNNFRRVVNK CPRLLTSSVK DQLRPCLVYL RRLGFKDLGA LAYQDSVLLV SNVENTLIPK
201: LKFLETLGLS KDEVRSMVLR CPALLTFSIE NNFQPKYEYF AGEMGRKLEE LKEFPQYFAF SLENRIKPRH MKVVQSGIAL ALPVMLKSTD EEFRELVKQG
301: SV

Best Arabidopsis Sequence Match ( AT2G34620.1 )
(BLAST)

001: MSAALSSSLY ISPKKPSCPQ QSQSTFLSTK PTTIKTNLHS HPLFTVADQT VTLQMKEKIL CLELMGIDSG KALSLNPCLC SAPLDSIQSV LHFLQSKGIY
101: PNDLPRILGM CPKILTSDVR TELYPVFMFL SNDLHVPENA FRRVIKKCPR LLISSVEDQL KPALFYLQRL GLKDLEALAY QDPILLVSSV EHTLIPKLRF
201: LESIGFSRPE AIGMILRCPA LFTFSIENNF KPKLDYFMSE IKGKLENLKE FPQYFAFSLE KRIKPRHLES MERGLELPLS LMLKSTDEEF EQLLTNPSSV
301: ANV

Arabidopsis Description

Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:O64685]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.