Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5B01G425900.1 | Wheat | plastid | 97.86 | 97.56 |
TraesCS5A01G423600.1 | Wheat | plastid | 94.5 | 96.56 |
Os03t0785200-01 | Rice | plastid | 79.82 | 84.19 |
Zm00001d011574_P001 | Maize | cytosol, extracellular, plastid | 37.0 | 79.08 |
OQU90879 | Sorghum | plastid | 77.06 | 79.0 |
GSMUA_Achr6P31220_001 | Banana | plastid | 33.64 | 48.89 |
AT2G34620.1 | Thale cress | plastid | 45.26 | 48.84 |
PGSC0003DMT400080487 | Potato | plastid | 45.57 | 48.06 |
Solyc02g021430.1.1 | Tomato | plastid | 44.95 | 48.04 |
KRH12828 | Soybean | plastid | 44.34 | 48.01 |
VIT_10s0003g04040.t01 | Wine grape | plastid | 50.46 | 46.88 |
CDX84297 | Canola | plastid | 45.57 | 45.15 |
KRH37793 | Soybean | plastid | 44.04 | 44.72 |
TraesCS4D01G156100.1 | Wheat | mitochondrion | 25.99 | 27.07 |
TraesCS6D01G188800.1 | Wheat | plastid | 18.35 | 21.43 |
TraesCS7D01G248600.1 | Wheat | cytosol | 14.37 | 15.11 |
TraesCS6D01G196900.1 | Wheat | plastid | 22.32 | 15.05 |
TraesCS2D01G198500.1 | Wheat | plastid | 21.41 | 14.86 |
TraesCS6D01G325000.1 | Wheat | mitochondrion | 22.02 | 14.66 |
TraesCS1D01G252000.1 | Wheat | plastid | 21.71 | 14.2 |
TraesCS2D01G255600.1 | Wheat | mitochondrion | 23.55 | 12.73 |
TraesCS5D01G372800.1 | Wheat | plastid | 21.71 | 12.14 |
Protein Annotations
Gene3D:1.25.70.10 | MapMan:15.6.2.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003690 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 |
GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 |
GO:GO:0009536 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0042646 | GO:GO:0071472 | InterPro:IPR038538 |
InterPro:MTERF | InterPro:MTERF_sf | PFAM:PF02536 | PANTHER:PTHR13068 | PANTHER:PTHR13068:SF78 | SMART:SM00733 |
EnsemblPlantsGene:TraesCS5D01G432100 | EnsemblPlants:TraesCS5D01G432100.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5D:-:488425188..488426171
Molecular Weight (calculated)
35565.3 Da
IEP (calculated)
8.699
GRAVY (calculated)
0.081
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLCSFYAST SLPVAKPHSL PSSAKLPSTA AAAITTVQPK KSPAAVAAAA AATVLPTTAE NTASMTPAEA LSLHLPELPS AMRDKILSLE LMGVDYGRAL
101: LLNPALRDAA PESIHAVVTF LQSRGLHFKD LGRVFGMCPS VLTASVRADL RPVFAFLTDD LGVPEAAYRR VVVKCPRVLA CSVRDQLRPA LIYLRRLGFR
201: DNRALAFQDP ILLVSSVERT MAPKLEYLAG LGMSRDDAVA MALRCPALFT FNVERNYKPK FEYLVEEMGG GVEDVKAFPQ YFTFSLEKRI APRHRAAADA
301: GVDLPLADML KATDEEFSEM LERGRSR
101: LLNPALRDAA PESIHAVVTF LQSRGLHFKD LGRVFGMCPS VLTASVRADL RPVFAFLTDD LGVPEAAYRR VVVKCPRVLA CSVRDQLRPA LIYLRRLGFR
201: DNRALAFQDP ILLVSSVERT MAPKLEYLAG LGMSRDDAVA MALRCPALFT FNVERNYKPK FEYLVEEMGG GVEDVKAFPQ YFTFSLEKRI APRHRAAADA
301: GVDLPLADML KATDEEFSEM LERGRSR
001: MSAALSSSLY ISPKKPSCPQ QSQSTFLSTK PTTIKTNLHS HPLFTVADQT VTLQMKEKIL CLELMGIDSG KALSLNPCLC SAPLDSIQSV LHFLQSKGIY
101: PNDLPRILGM CPKILTSDVR TELYPVFMFL SNDLHVPENA FRRVIKKCPR LLISSVEDQL KPALFYLQRL GLKDLEALAY QDPILLVSSV EHTLIPKLRF
201: LESIGFSRPE AIGMILRCPA LFTFSIENNF KPKLDYFMSE IKGKLENLKE FPQYFAFSLE KRIKPRHLES MERGLELPLS LMLKSTDEEF EQLLTNPSSV
301: ANV
101: PNDLPRILGM CPKILTSDVR TELYPVFMFL SNDLHVPENA FRRVIKKCPR LLISSVEDQL KPALFYLQRL GLKDLEALAY QDPILLVSSV EHTLIPKLRF
201: LESIGFSRPE AIGMILRCPA LFTFSIENNF KPKLDYFMSE IKGKLENLKE FPQYFAFSLE KRIKPRHLES MERGLELPLS LMLKSTDEEF EQLLTNPSSV
301: ANV
Arabidopsis Description
Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:O64685]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.