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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G425900.1 Wheat plastid 97.86 97.56
TraesCS5A01G423600.1 Wheat plastid 94.5 96.56
Os03t0785200-01 Rice plastid 79.82 84.19
Zm00001d011574_P001 Maize cytosol, extracellular, plastid 37.0 79.08
OQU90879 Sorghum plastid 77.06 79.0
GSMUA_Achr6P31220_001 Banana plastid 33.64 48.89
AT2G34620.1 Thale cress plastid 45.26 48.84
PGSC0003DMT400080487 Potato plastid 45.57 48.06
Solyc02g021430.1.1 Tomato plastid 44.95 48.04
KRH12828 Soybean plastid 44.34 48.01
VIT_10s0003g04040.t01 Wine grape plastid 50.46 46.88
CDX84297 Canola plastid 45.57 45.15
KRH37793 Soybean plastid 44.04 44.72
TraesCS4D01G156100.1 Wheat mitochondrion 25.99 27.07
TraesCS6D01G188800.1 Wheat plastid 18.35 21.43
TraesCS7D01G248600.1 Wheat cytosol 14.37 15.11
TraesCS6D01G196900.1 Wheat plastid 22.32 15.05
TraesCS2D01G198500.1 Wheat plastid 21.41 14.86
TraesCS6D01G325000.1 Wheat mitochondrion 22.02 14.66
TraesCS1D01G252000.1 Wheat plastid 21.71 14.2
TraesCS2D01G255600.1 Wheat mitochondrion 23.55 12.73
TraesCS5D01G372800.1 Wheat plastid 21.71 12.14
Protein Annotations
Gene3D:1.25.70.10MapMan:15.6.2.2GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003690
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006139
GO:GO:0006355GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009507
GO:GO:0009536GO:GO:0009628GO:GO:0009987GO:GO:0042646GO:GO:0071472InterPro:IPR038538
InterPro:MTERFInterPro:MTERF_sfPFAM:PF02536PANTHER:PTHR13068PANTHER:PTHR13068:SF78SMART:SM00733
EnsemblPlantsGene:TraesCS5D01G432100EnsemblPlants:TraesCS5D01G432100.1SEG:seg:::
Description
No Description!
Coordinates
chr5D:-:488425188..488426171
Molecular Weight (calculated)
35565.3 Da
IEP (calculated)
8.699
GRAVY (calculated)
0.081
Length
327 amino acids
Sequence
(BLAST)
001: MPLCSFYAST SLPVAKPHSL PSSAKLPSTA AAAITTVQPK KSPAAVAAAA AATVLPTTAE NTASMTPAEA LSLHLPELPS AMRDKILSLE LMGVDYGRAL
101: LLNPALRDAA PESIHAVVTF LQSRGLHFKD LGRVFGMCPS VLTASVRADL RPVFAFLTDD LGVPEAAYRR VVVKCPRVLA CSVRDQLRPA LIYLRRLGFR
201: DNRALAFQDP ILLVSSVERT MAPKLEYLAG LGMSRDDAVA MALRCPALFT FNVERNYKPK FEYLVEEMGG GVEDVKAFPQ YFTFSLEKRI APRHRAAADA
301: GVDLPLADML KATDEEFSEM LERGRSR
Best Arabidopsis Sequence Match ( AT2G34620.1 )
(BLAST)
001: MSAALSSSLY ISPKKPSCPQ QSQSTFLSTK PTTIKTNLHS HPLFTVADQT VTLQMKEKIL CLELMGIDSG KALSLNPCLC SAPLDSIQSV LHFLQSKGIY
101: PNDLPRILGM CPKILTSDVR TELYPVFMFL SNDLHVPENA FRRVIKKCPR LLISSVEDQL KPALFYLQRL GLKDLEALAY QDPILLVSSV EHTLIPKLRF
201: LESIGFSRPE AIGMILRCPA LFTFSIENNF KPKLDYFMSE IKGKLENLKE FPQYFAFSLE KRIKPRHLES MERGLELPLS LMLKSTDEEF EQLLTNPSSV
301: ANV
Arabidopsis Description
Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:O64685]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.