Factsheet for TraesCS4D01G156100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G156500.1	Wheat	mitochondrion	98.09	98.09
TraesCS1A01G084300.1	Wheat	mitochondrion	97.13	97.13
HORVU4Hr1G045210.1	Barley	plastid	93.63	86.73
Os03t0360600-00	Rice	cytosol, mitochondrion	80.57	84.05
Zm00001d047442_P001	Maize	plastid	70.38	74.16
KXG39318	Sorghum	plastid	73.25	73.48
Zm00001d029242_P001	Maize	plastid	69.75	72.28
PGSC0003DMT400075363	Potato	cytosol	29.3	44.23
GSMUA_AchrUn_...	Banana	plastid	40.13	37.39
Bra017269.1-P	Field mustard	plastid	38.22	36.25
AT2G36000.1	Thale cress	plastid	36.62	34.53
PGSC0003DMT400085903	Potato	plastid	34.39	33.75
VIT_08s0007g02500.t01	Wine grape	plastid	35.99	33.43
KRH13722	Soybean	plastid	35.35	32.65
Solyc01g007750.2.1	Tomato	plastid	32.8	32.49
KRH43735	Soybean	plastid	34.71	32.25
TraesCS5D01G432100.1	Wheat	plastid	27.07	25.99
TraesCS6D01G188800.1	Wheat	plastid	16.24	18.21
TraesCS7D01G248600.1	Wheat	cytosol	15.29	15.43
TraesCS6D01G196900.1	Wheat	plastid	23.57	15.26
TraesCS1D01G252000.1	Wheat	plastid	21.97	13.8
TraesCS2D01G198500.1	Wheat	plastid	20.06	13.38
TraesCS2D01G255600.1	Wheat	mitochondrion	24.2	12.56
TraesCS6D01G325000.1	Wheat	mitochondrion	18.47	11.81
TraesCS5D01G372800.1	Wheat	plastid	18.15	9.74

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068
PANTHER:PTHR13068:SF47	SMART:SM00733	EnsemblPlantsGene:TraesCS4D01G156100	EnsemblPlants:TraesCS4D01G156100.1	SEG:seg	:

Description

No Description!

Coordinates

chr4D:+:209904083..209905027

Molecular Weight (calculated)

34670.2 Da

IEP (calculated)

9.926

GRAVY (calculated)

-0.087

Length

314 amino acids

Sequence
(BLAST)

001: MEELLLRHGR LSRPVATRRL RVVAVALRSR PSSSLAVPGF PPATAPAPAP ALEHVLPSPH VAADAAAVLL EAGVRPEDLR RAAGMCPELM SVPVETITAA
101: LRFLTDEAGV PAEELPRVLR RRPRLLVSSA AARLRPTLYF LRALGVPDLH RRADLLSFSV EDKLLPRIEF LESLGLPSRA ARSMARRFPA LFYYGIDGNM
201: RPKAEYLLGV MGRDADELFD FPEYFSYALD TRIATRHEAC AARGVRMPLP AMLRPGERKF EDCLAGCVGS TPPRRRSPLW HAYWVDGDGA GVSAVVEKAR
301: RDDAIVASYR HVHY

Best Arabidopsis Sequence Match ( AT2G36000.1 )
(BLAST)

001: MQQEALSFLS SSLPSLHHNF PSLSRLRFNN FPALSFKPNT SSSSSSFFKS PDIPSLSSTT TTTTTTETLE SSIHEKLIYL DSLGIDFLTL INRHPPLLST
101: ALSAVESVVD YMTTPPINFT LQDFRRLVSM CPELLTSPLT SHTIPVITFL LREVGVDSIF DLRQALRRRP RLLACSVDHQ LRPTLYFLQR IGILDPHKHT
201: YLLSCSVDNK LVPRIDYFEK LGFSRRSATA MFKRFPQLFN YSIAENYEPK LKYLMVEMGR DVREVLEFPQ YFSFSLENRI KPRHEACAAK GVRFPLPVML
301: KTNEAGFRDT LEVCCDSSPP LKTSRLVTVQ KDS

Arabidopsis Description

At2g36000/F11F19.9 [Source:UniProtKB/TrEMBL;Acc:Q9SJ50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.