Factsheet for Os03t0360600-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G156100.1	Wheat	mitochondrion	84.05	80.57
TraesCS4B01G156500.1	Wheat	mitochondrion	83.39	79.94
TraesCS1A01G084300.1	Wheat	mitochondrion	83.06	79.62
KXG39318	Sorghum	plastid	79.73	76.68
Zm00001d047442_P001	Maize	plastid	75.75	76.51
Zm00001d029242_P001	Maize	plastid	76.08	75.58
HORVU4Hr1G045210.1	Barley	plastid	82.06	72.86
PGSC0003DMT400075363	Potato	cytosol	30.56	44.23
GSMUA_AchrUn_...	Banana	plastid	43.19	38.58
Bra017269.1-P	Field mustard	plastid	40.86	37.16
AT2G36000.1	Thale cress	plastid	38.87	35.14
VIT_08s0007g02500.t01	Wine grape	plastid	38.21	34.02
PGSC0003DMT400085903	Potato	plastid	35.55	33.44
KRH13722	Soybean	plastid	37.21	32.94
KRH43735	Soybean	plastid	36.21	32.25
Solyc01g007750.2.1	Tomato	plastid	33.89	32.18
Os03t0785200-01	Rice	plastid	29.24	28.39
Os02t0577501-00	Rice	plastid	20.93	22.34
Os08t0515800-01	Rice	cytosol	16.61	15.02
Os05t0404000-01	Rice	plastid	23.92	14.17
Os07t0583200-01	Rice	endoplasmic reticulum, plastid	22.26	13.32
Os02t0783100-01	Rice	mitochondrion	21.26	13.2
Os09t0560100-00	Rice	plasma membrane, plastid	24.58	12.09
Os07t0134700-00	Rice	plastid	23.59	11.68

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	EntrezGene:4332887	ProteinID:ABF96077.1	ProteinID:BAF12069.1	ProteinID:BAS84282.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502
GO:GO:0042255	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	EnsemblPlantsGene:Os03g0360600	EnsemblPlants:Os03t0360600-00
PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF47	UniProt:Q10L33	SMART:SM00733	UniParc:UPI0000DB4DBC
RefSeq:XP_015628933.1	SEG:seg	:	:	:	:

Description

Mitochodrial transcription termination factor-related family protein. (Os03t0360600-00)

Coordinates

chr3:+:14006157..14007356

Molecular Weight (calculated)

32897.2 Da

IEP (calculated)

10.439

GRAVY (calculated)

-0.056

Length

301 amino acids

Sequence
(BLAST)

001: MEEVLLRHAR LPRPTAPTAR RSRRLRVVAV ALRTRPTSLA VPGFPPAPAP APEHVLLPSP SVAAGAAEVL LAAGVPPADL RRAAGMCPEL LSVPVGTITA
101: ALRFLTDEAG VPAEDLPRVL RRRPRLLVSP VAARLRPTLY FLRALGVPDL PRRADLLSFS VEDKLLPRIE FLESLGLPSR AARSMARRFP ALFYYGIDGN
201: MRPKAEYLLG DMARDADDLF EFPEYFSYAL ATRIAPRHEA CAARGVRMPL PAMLRPGDDK FRATLAGCVG STPPRRRSPL WHAYWVDDAG EVEEIGAASQ
301: P

Best Arabidopsis Sequence Match ( AT2G36000.1 )
(BLAST)

001: MQQEALSFLS SSLPSLHHNF PSLSRLRFNN FPALSFKPNT SSSSSSFFKS PDIPSLSSTT TTTTTTETLE SSIHEKLIYL DSLGIDFLTL INRHPPLLST
101: ALSAVESVVD YMTTPPINFT LQDFRRLVSM CPELLTSPLT SHTIPVITFL LREVGVDSIF DLRQALRRRP RLLACSVDHQ LRPTLYFLQR IGILDPHKHT
201: YLLSCSVDNK LVPRIDYFEK LGFSRRSATA MFKRFPQLFN YSIAENYEPK LKYLMVEMGR DVREVLEFPQ YFSFSLENRI KPRHEACAAK GVRFPLPVML
301: KTNEAGFRDT LEVCCDSSPP LKTSRLVTVQ KDS

Arabidopsis Description

At2g36000/F11F19.9 [Source:UniProtKB/TrEMBL;Acc:Q9SJ50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.