Factsheet for Os02t0577501-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
extracellular 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G051070.1	Barley	cytosol, extracellular, plastid	78.01	78.57
TraesCS6A01G201500.1	Wheat	extracellular, mitochondrion, plastid	78.01	78.57
TraesCS6D01G188800.1	Wheat	plastid	78.01	78.57
TraesCS6B01G219200.1	Wheat	plastid	78.37	78.37
OQU85198	Sorghum	mitochondrion, plastid	76.6	77.42
Zm00001d050886_P001	Maize	mitochondrion	76.24	77.06
Os03t0360600-00	Rice	cytosol, mitochondrion	22.34	20.93
Os03t0785200-01	Rice	plastid	21.99	20.0
Os08t0515800-01	Rice	cytosol	14.89	12.61
Os07t0134700-00	Rice	plastid	25.53	11.84
Os05t0404000-01	Rice	plastid	20.57	11.42
Os07t0583200-01	Rice	endoplasmic reticulum, plastid	19.15	10.74
Os02t0783100-01	Rice	mitochondrion	18.44	10.72
Os09t0560100-00	Rice	plasma membrane, plastid	21.28	9.8

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	EntrezGene:4329761	ProteinID:BAD34257.1	ProteinID:BAH91763.1	ProteinID:BAS79392.1
ProteinID:EAZ23553.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723
GO:GO:0003727	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0019843
GO:GO:0032502	GO:GO:0042255	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	EnsemblPlantsGene:Os02g0577501
EnsemblPlants:Os02t0577501-00	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF36	UniProt:Q69JV5	SMART:SM00733
UniParc:UPI000035AFD8	RefSeq:XP_015626903.1	RefSeq:XP_015626904.1	SEG:seg	:	:

Description

Mitochodrial transcription termination factor-related family protein. (Os02t0577501-00)

Coordinates

chr2:-:22180079..22181019

Molecular Weight (calculated)

30634.9 Da

IEP (calculated)

11.943

GRAVY (calculated)

0.102

Length

282 amino acids

Sequence
(BLAST)

001: MLATTRLPPP PAAAAAAAAT PTPPARGGGG GGVEFRRKLY FLSSELHLDP FPLLALHPPL RAAPLPQLRA SLALLLSHGL SAGDAARVFS AFPSLLTSPP
101: GEHLRFLSAD APLPPPLLRA AVVRSPRLLA ASVPGTLRPA LRFLRRRVAL RRRPLPLAAA LLLAFSVDRT LLPKLLFLRD ATGMPDPAVC AILRRAPAIL
201: SYGIQTNLTP KLRFLADRMG RDPAVELAEF PHYFAFSLEG RIRPRHEALK ERRVQMSLKD MLTISDDEFR ERLVDAALSA PR

Best Arabidopsis Sequence Match ( AT2G03050.1 )
(BLAST)

001: MIARCSLFPP PCFSAVRIRC FAGETSDTGI LFREKLIYLQ DLNVDPHKAL RVNPSLRSAP ISSVVSVETL LSSTGLSRPA VGRILDMFPD LLTSDPESEI
101: LPVLRFLSNE ISISEQDIPK SISRCPRLLI SSVDYQLRPA LTFLKTLGFV GRDTITSRNT VLLVSNVERT LIPKIEYLEE GLGFTREEVA KMVVRSPALL
201: TYSVDNNLVP KVEFFIEEMR GDVKELKRFP QYFSFSLERK IKPRHRLLKE HGILMPLSEM LKVSDGQFNH WLLELRLRSA ERR

Arabidopsis Description

MTERF1SOLDAT10 [Source:UniProtKB/TrEMBL;Acc:A0A178VYV9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.