Factsheet for Zm00001d050886_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85198	Sorghum	mitochondrion, plastid	92.47	92.47
Os02t0577501-00	Rice	plastid	77.06	76.24
HORVU6Hr1G051070.1	Barley	cytosol, extracellular, plastid	74.19	73.93
TraesCS6A01G201500.1	Wheat	extracellular, mitochondrion, plastid	73.84	73.57
TraesCS6D01G188800.1	Wheat	plastid	73.84	73.57
TraesCS6B01G219200.1	Wheat	plastid	74.19	73.4
Zm00001d011574_P001	Maize	cytosol, extracellular, plastid	11.11	20.26
Zm00001d047442_P001	Maize	plastid	20.07	18.79
Zm00001d029242_P001	Maize	plastid	19.71	18.15
Zm00001d049743_P001	Maize	cytosol, mitochondrion, nucleus	15.77	13.17
Zm00001d018756_P001	Maize	plastid	25.45	11.6
Zm00001d017130_P001	Maize	plastid	20.07	11.52
Zm00001d052081_P003	Maize	mitochondrion	18.28	10.43
Zm00001d027230_P001	Maize	plastid	21.86	9.95
Zm00001d010340_P001	Maize	plastid	17.56	9.92
Zm00001d021376_P001	Maize	cytosol	21.86	9.5
Zm00001d006700_P003	Maize	mitochondrion, plastid	17.92	8.68

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:100273894	MapMan:15.6.2.2	ProteinID:AQK53203.1	UniProt:B4FY09	EMBL:BT041997
GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009658	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016043
InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF36
SMART:SM00733	UniParc:UPI00017B7472	EnsemblPlantsGene:Zm00001d050886	EnsemblPlants:Zm00001d050886_P001	EnsemblPlants:Zm00001d050886_T001	SEG:seg

Description

mTERF-domain protein13Transcription termination factor MTERF2 chloroplastic

Coordinates

chr4:-:128466573..128467412

Molecular Weight (calculated)

31158.4 Da

IEP (calculated)

11.088

GRAVY (calculated)

-0.002

Length

279 amino acids

Sequence
(BLAST)

001: MAMLARARLP PRTHLPPITT DGGGAGVEFR RKIHFLSSEL HVDPFPLLAI NPMLRSAPLP LLRDSLRLLT SHGLTTLDAA RVFSAFPSLL TSPPEEPLRF
101: LSADAPLPPP LLRSAVVRSP RLLAASVPDT LRPALLFFRR RVSLRREPLP LAAALLLAFN VERTLLPKLL FLRDATGLPD SAVCAVLRRA PAILSYGIET
201: NLRPKLEFLA ERMQRDPAAE LAEFPHYFAF SLEGRIKPRH EALRERGIEM PLKDMLTSND DDFRERLVNV TLSDTKARL

Best Arabidopsis Sequence Match ( AT2G03050.2 )
(BLAST)

001: MMIARCSLFP PPCFSAVRIR CFAGETSDTG ILFREKLIYL QDLNVDPHKA LRVNPSLRSA PISSVVSVET LLSSTGLSRP AVGRILDMFP DLLTSDPESE
101: ILPVLRFLSN EISISEQDIP KSISRCPRLL ISSVDYQLRP ALTFLKTLGF VGRDTITSRN TVLLVSNVER TLIPKIEYLE EGLGFTREEV AKMVVRSPAL
201: LTYSVDNNLV PKVEFFIEEM RGDVKELKRF PQYFSFSLER KIKPRHRLLK EHGILMPLSE MLKVSDGQFN HWLLELRLRS AERR

Arabidopsis Description

MTERF1SOLDAT10 [Source:UniProtKB/TrEMBL;Acc:A0A178VYV9]
SUBAcon: [cytosol,plastid,golgi,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.