Skip to main content
crop-pal logo
Barley
Search for another protein from :
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:
  • plastid 3
  • cytosol 1
  • nucleus 1
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, plastid
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G219200.1 Wheat plastid 93.93 93.26
TraesCS6A01G201500.1 Wheat extracellular, mitochondrion, plastid 93.21 93.21
TraesCS6D01G188800.1 Wheat plastid 92.5 92.5
Os02t0577501-00 Rice plastid 78.57 78.01
Zm00001d050886_P001 Maize mitochondrion 73.93 74.19
OQU85198 Sorghum mitochondrion, plastid 73.21 73.48
HORVU4Hr1G045210.1 Barley plastid 18.21 15.04
HORVU6Hr1G054650.2 Barley plastid 20.71 11.93
HORVU1Hr1G061210.8 Barley plastid 19.64 11.07
HORVU5Hr1G089290.3 Barley cytosol 20.36 10.63
HORVU2Hr1G036490.17 Barley mitochondrion 18.57 10.34
HORVU7Hr1G051550.3 Barley mitochondrion 14.29 10.34
HORVU6Hr1G082970.1 Barley cytosol 18.57 9.87
HORVU0Hr1G013680.1 Barley mitochondrion 6.79 8.19
Protein Annotations
Gene3D:1.25.70.10MapMan:15.6.2.2EMBL:AK359589UniProt:F2D6S7GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003690GO:GO:0005488GO:GO:0006139GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:HORVU6Hr1G051070EnsemblPlants:HORVU6Hr1G051070.1InterPro:IPR038538
InterPro:MTERFInterPro:MTERF_sfPFAM:PF02536PANTHER:PTHR13068PANTHER:PTHR13068:SF36SMART:SM00733
UniParc:UPI0002005769SEG:seg::::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D6S7]
Coordinates
chrchr6H:-:310461921..310512475
Molecular Weight (calculated)
30733.9 Da
IEP (calculated)
10.428
GRAVY (calculated)
0.111
Length
280 amino acids
Sequence
(BLAST)
001: MLAYTPLPPP PPHPAQILPV RLAGGGGVEF RRKLHFLSAE LHVDPFPLLA LHPELRSAPL SLLHASLRLL LSHGLSAGDA SRVFSAFPSL LTSPPEESLR
101: FLSTAAPLPP PLLRTAVVRS PRLLAASIPD TLRPALYFLR HRVSLRRRPL PLAAALLLAF SVDRTLLPKL LFLGDATRLP DPAICTIIRR APAILSYGIE
201: TNLTPKLKFL ADGMGMDPAA ELTEFPHYFA FSLEGRIKPR HEALRVRGVD MSLKEMLTSS DDEFKERILD AALSGNTERT
Best Arabidopsis Sequence Match ( AT2G03050.1 )
(BLAST)
001: MIARCSLFPP PCFSAVRIRC FAGETSDTGI LFREKLIYLQ DLNVDPHKAL RVNPSLRSAP ISSVVSVETL LSSTGLSRPA VGRILDMFPD LLTSDPESEI
101: LPVLRFLSNE ISISEQDIPK SISRCPRLLI SSVDYQLRPA LTFLKTLGFV GRDTITSRNT VLLVSNVERT LIPKIEYLEE GLGFTREEVA KMVVRSPALL
201: TYSVDNNLVP KVEFFIEEMR GDVKELKRFP QYFSFSLERK IKPRHRLLKE HGILMPLSEM LKVSDGQFNH WLLELRLRSA ERR
Arabidopsis Description
MTERF1SOLDAT10 [Source:UniProtKB/TrEMBL;Acc:A0A178VYV9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.