Factsheet for HORVU2Hr1G036490.17

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G198500.1	Wheat	plastid	89.07	95.12
TraesCS2B01G218100.1	Wheat	plastid	94.04	94.79
TraesCS2A01G189200.1	Wheat	plastid	94.04	94.79
EER97446	Sorghum	mitochondrion	79.13	78.66
Os07t0583200-01	Rice	endoplasmic reticulum, plastid	78.53	78.53
PGSC0003DMT400076662	Potato	cytosol	41.55	71.58
Zm00001d006700_P003	Maize	mitochondrion, plastid	78.53	68.58
GSMUA_Achr3P29890_001	Banana	plastid	60.24	59.76
KRH73870	Soybean	plastid	53.48	54.9
KRH14270	Soybean	plastid	54.08	54.73
Solyc12g015640.1.1	Tomato	plastid	50.7	52.9
Bra028970.1-P	Field mustard	plastid	50.3	51.42
CDY66686	Canola	extracellular, vacuole	50.3	51.32
CDY36755	Canola	nucleus, vacuole	50.3	51.32
AT5G55580.1	Thale cress	plastid	50.3	51.01
VIT_19s0090g01770.t01	Wine grape	plastid	46.92	46.92
HORVU6Hr1G051070.1	Barley	cytosol, extracellular, plastid	10.34	18.57
HORVU4Hr1G045210.1	Barley	plastid	12.33	18.29
HORVU1Hr1G061210.8	Barley	plastid	16.9	17.1
HORVU6Hr1G054650.2	Barley	plastid	15.9	16.46
HORVU6Hr1G082970.1	Barley	cytosol	16.5	15.75
HORVU7Hr1G051550.3	Barley	mitochondrion	11.93	15.5
HORVU5Hr1G089290.3	Barley	cytosol	15.11	14.18
HORVU0Hr1G013680.1	Barley	mitochondrion	3.98	8.62

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	UniProt:A0A287HPR6	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003690	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009651	GO:GO:0009658
GO:GO:0009987	GO:GO:0016043	GO:GO:0048364	GO:GO:0048367	EnsemblPlantsGene:HORVU2Hr1G036490	EnsemblPlants:HORVU2Hr1G036490.17
InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF13
SMART:SM00733	UniParc:UPI000B47BAFB	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:161711845..161715264

Molecular Weight (calculated)

57841.5 Da

IEP (calculated)

9.587

GRAVY (calculated)

-0.527

Length

503 amino acids

Sequence
(BLAST)

001: QLRPPPLAAL GHCALPCRLF PSATARRSLA SVAFSLQTNV RLLKPNRRSR RSRYPYYDLD DDEEEEDEED YEDDESESKV PSGVQQADDL SGLEYPGVLY
101: TNNPRAPSKR AGRKTQLVKE NWEGRRPKTR DKHGSPERSN SLQPRSKINR TLLDLTSMNN EVELKNESIS RSLFEKLQEE YDFDDKWLPL IDYLCSFGLR
201: ESHFTYIYER HMACLQINRA SAEERLEFLL SVGVKSKDLK RILVRQPQIL EYTLSNLKSH VAFLAGIGVP DARMGQIISS APSFLSYSIE QSLKPTISYL
301: IEEVGIEESD VGKVVQLSPQ ILVQRIDNAW KSRFLFLSKE LGAPKDSIVK MVTKHPQLLH YSIEEGILPR INFLRSIGMR NSDILKILTS LTQVLSLSLE
401: KNLKPKYLYL VNDLKNEAQS LTKYPMYLSL SLEQRIRPRH RFLVSLKKAP KGPFPLSSFV LTDERFCQRW AGTSLEKYHT FRQSLLLTGF EEKTGRKPLA
501: SRR

Best Arabidopsis Sequence Match ( AT5G55580.1 )
(BLAST)

001: MAGFSLYCFK NPRILFTLPS ESPLFVLGSD KCSPATRRPS RKTRGFVVTY AHSNPKIINP KKKSRYGQTL SPYDSDEDDD DDDDDDDDDW LLNDDFAEVT
101: EYEKKKPKSH KQTIAKKSVK KGIVKPEESE TDEDDLDLGI SPNATSEKKK ESWRLDGRGK MSSRKYVEKL YPRLAEEIDI DPKCVPLLDY LSTFGLKESH
201: FVQMYERHMP SLQINVFSAQ ERLDYLLSVG VKHRDIKRML LRQPQILQYT VENNLKAHIS FLMGLGIPNS KIGQIVAATP SLFSYSVENS LRPTIRYLIE
301: EVGIKETDVG KVVQLSPQIL VQRLDITWNT RYMFLSKELG APRDSVVKMV KKHPQLLHYS IDDGFLPRIN FLRSIGMCNS DILKVLTSLT QVLSLSLEDN
401: LKPKYMYLVN ELNNEVHILT KYPMYLSLSL DQRIRPRHRF LVELKKVRKG PFPLSSLVPN DESFCQQWAG TSVDTYLAFR QRLLLKEFAN KYDKRG

Arabidopsis Description

MTERF9Transcription termination factor MTERF9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FM80]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.