Factsheet for HORVU6Hr1G082970.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G376100.1	Wheat	mitochondrion	91.65	98.37
TraesCS6D01G325000.1	Wheat	mitochondrion	91.27	97.96
TraesCS6A01G343900.1	Wheat	plastid	93.74	91.48
Os02t0783100-01	Rice	mitochondrion	80.65	87.63
EES07645	Sorghum	mitochondrion	81.21	87.53
Zm00001d052081_P003	Maize	mitochondrion	80.83	87.12
Bra004800.1-P	Field mustard	cytosol	55.03	64.88
VIT_11s0016g02240.t01	Wine grape	mitochondrion	57.69	63.2
GSMUA_Achr10P...	Banana	mitochondrion	44.02	62.53
KRH60420	Soybean	cytosol	48.39	62.5
CDX79786	Canola	mitochondrion	56.55	60.45
PGSC0003DMT400023814	Potato	mitochondrion	56.36	60.37
Solyc11g017050.1.1	Tomato	extracellular	56.93	60.24
KRH41721	Soybean	mitochondrion	56.36	59.52
CDY17890	Canola	mitochondrion	56.17	59.44
AT2G44020.1	Thale cress	mitochondrion	56.74	58.97
HORVU1Hr1G061210.8	Barley	plastid	41.56	44.06
HORVU7Hr1G051550.3	Barley	mitochondrion	14.04	19.12
HORVU6Hr1G054650.2	Barley	plastid	17.27	18.72
HORVU6Hr1G051070.1	Barley	cytosol, extracellular, plastid	9.87	18.57
HORVU5Hr1G089290.3	Barley	cytosol	18.22	17.91
HORVU4Hr1G045210.1	Barley	plastid	11.2	17.4
HORVU2Hr1G036490.17	Barley	mitochondrion	15.75	16.5
HORVU0Hr1G013680.1	Barley	mitochondrion	4.74	10.78

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	MapMan:16.12.2.2.1.5	UniProt:A0A287UXY0	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003690	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU6Hr1G082970	EnsemblPlants:HORVU6Hr1G082970.1	InterPro:IPR038538
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF8	SMART:SM00733
UniParc:UPI000B4784A1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:550201872..550203701

Molecular Weight (calculated)

57591.7 Da

IEP (calculated)

9.000

GRAVY (calculated)

-0.004

Length

527 amino acids

Sequence
(BLAST)

001: MRPTTEELYP HSXXXXXXXX XXXXXPPLSP RRAAAAMLPL ARAALRRLGP AAAGGGSLPA RLLLLAPLAS KPSSSTPPEY QMPSVTWGVI QGRRERLVSR
101: VLALDFLRSA GVTDPAGELE AVELPSSLDV LQERLDFLLR LGLSTDDLSA YPFLLACSLR KNVIPVLSYL EKLGVTRARL AAFVRAYPAC LHASVAVDLA
201: PIVKALRGLD VDRQDIPRVL ERYPDVLGLK PDGTISTSVA YLVGILGVAP RDIGPMVTHY PFFLSMRVGT TIKPFCDYIT SLGLPMRILA RIIEKRPYIL
301: GYDLEETVKP NVEALLSFGI RKEVLPLMIA QYPSILGLPL KVKLAAQQYF FNLKLKIDPD GFARAVEKLP QLVSLHQNVI LKPVEFLRGR GITDDDIGRM
401: LIRCPQILLL RNELMKNSFY FFKSELKRPI SELLEYPEYF TYSLESRIKP RYMRVASKGI RCSLDWFLNC SDQRFEERMR GDFIEGDAPG PSFTMGGKLQ
501: MPGNQIVSDD DNEDSDDEVL YRRTIWW

Best Arabidopsis Sequence Match ( AT2G44020.1 )
(BLAST)

001: MSYLLRRNKF VALLKRQSLI FPITSTEAKT LINPDPNIPQ FQNPCSIFRI AHYATQSSKF PEYEMPTVTW GVIQGKKEKL VNRVKICDYL KGLGIITDEL
101: ESIELPSTIE VMCERVEFLQ KLGLTIDDIN EYPLMLGCSV RKNLIPVLAY LEKIGISRSK LGEFVKNYPQ VLHASVVVEL APVVKFLRGL DVEKQDLGYV
201: LMKYPELLGF KLEGTMSTSV AYLVSIGVSP RDIGPMVTQY PYLLGMRVGT MIKPLVDYLI SIGLPKKIVA RMLEKRSYIV GYNLEETVKP NVDCLISFGV
301: KKELLPLLIA QYPQILGLPV KAKMSTQQYF FSLKLKIDPE GFARVVEKMP QIVSLKQNVI MKPIEFLLGR AFQVEDIAKM VVRCPQILCS RVELMKNSYY
401: FYKTEMGRPM KELVEYPEYF TYSLESRIKP RYQKLQSKGI RSSLNWFLNC SDQRFEERLQ GNFIDPDTEG PTFDMGGKLE MPGGEIVTDE EEDESDDEVL
501: YRRTLTL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80572]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.