CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052081_P003	Maize	mitochondrion	96.93	96.93
Os02t0783100-01	Rice	mitochondrion	88.34	89.07
TraesCS6D01G325000.1	Wheat	mitochondrion	87.53	87.17
TraesCS6B01G376100.1	Wheat	mitochondrion	87.53	87.17
HORVU6Hr1G082970.1	Barley	cytosol	87.53	81.21
TraesCS6A01G343900.1	Wheat	plastid	87.93	79.63
Bra004800.1-P	Field mustard	cytosol	61.35	67.11
VIT_11s0016g02240.t01	Wine grape	mitochondrion	62.58	63.62
KRH60420	Soybean	cytosol	52.15	62.5
CDX79786	Canola	mitochondrion	62.58	62.07
GSMUA_Achr10P...	Banana	mitochondrion	47.03	61.99
CDY17890	Canola	mitochondrion	62.17	61.04
KRH41721	Soybean	mitochondrion	61.35	60.12
PGSC0003DMT400023814	Potato	mitochondrion	60.33	59.96
Solyc11g017050.1.1	Tomato	extracellular	60.74	59.64
AT2G44020.1	Thale cress	mitochondrion	61.76	59.57
OQU77962	Sorghum	plastid	44.99	44.18
EES14251	Sorghum	cytosol	15.75	23.05
OQU90879	Sorghum	plastid	13.7	21.0
KXG30576	Sorghum	cytosol	20.45	20.33
OQU85198	Sorghum	mitochondrion, plastid	10.84	19.0
KXG39318	Sorghum	plastid	12.07	18.85
OQU89932	Sorghum	plastid	19.43	15.6
EER97446	Sorghum	mitochondrion	15.54	15.02
OQU88410	Sorghum	plastid	17.59	14.29

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	MapMan:16.12.2.2.1.5	EntrezGene:8081953	UniProt:C5XTQ2	EnsemblPlants:EES07645
ProteinID:EES07645	ProteinID:EES07645.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0003723	GO:GO:0003727	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008380
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043
GO:GO:0019843	GO:GO:0032502	GO:GO:0042255	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf
PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF8	SMART:SM00733	EnsemblPlantsGene:SORBI_3004G321700	UniParc:UPI0001A86238
RefSeq:XP_002454669.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:65675085..65677861

Molecular Weight (calculated)

54667.1 Da

IEP (calculated)

7.747

GRAVY (calculated)

0.067

Length

489 amino acids

Sequence
(BLAST)

001: MAPLARTLRS LSQAAAAREG PLLAWLFSSR SAAFSSSAPP EYDMPSVTWG VIQGRKERLV SRVLALDFLR SAGVSDPAGE LEAVELPSSL EVLQERLDFL
101: LRLGLSTDDL SNYPLLLACS LRKNVIPVLS YLEKLGVTRA RLAAFVRAYP ACLHASVAVD LAPMVKALRG LDVDRQDLPR VLERYPDVLG LKPDGTISTS
201: VAYLVGIVGV APRDIGPMVT HFPFFLGMRV GTTIKPFCDY ITSLGLPMRI LARILEKRPY ILGYDLEETV KPNVEALLSF GIQKEALPLV IAQYPSILGL
301: PLKAKLAAQQ YFFSLKLQID PDGFARAVEK LPQLVSLNQN VILKPVEFLR GRGISNEDVA RMVVRCPQIL LLRIELMKNS LYFFKSEMKR PMSELLEYPE
401: YFTYSLESRI KPRYMRVTSK GIKCSLDWFL NCSDMRFEER MQGDFIEGDA PGPLFTMGGK LQMPGSQLVS DDDNEDTDDE VLYRRTVMI

Best Arabidopsis Sequence Match ( AT2G44020.1 )
(BLAST)

001: MSYLLRRNKF VALLKRQSLI FPITSTEAKT LINPDPNIPQ FQNPCSIFRI AHYATQSSKF PEYEMPTVTW GVIQGKKEKL VNRVKICDYL KGLGIITDEL
101: ESIELPSTIE VMCERVEFLQ KLGLTIDDIN EYPLMLGCSV RKNLIPVLAY LEKIGISRSK LGEFVKNYPQ VLHASVVVEL APVVKFLRGL DVEKQDLGYV
201: LMKYPELLGF KLEGTMSTSV AYLVSIGVSP RDIGPMVTQY PYLLGMRVGT MIKPLVDYLI SIGLPKKIVA RMLEKRSYIV GYNLEETVKP NVDCLISFGV
301: KKELLPLLIA QYPQILGLPV KAKMSTQQYF FSLKLKIDPE GFARVVEKMP QIVSLKQNVI MKPIEFLLGR AFQVEDIAKM VVRCPQILCS RVELMKNSYY
401: FYKTEMGRPM KELVEYPEYF TYSLESRIKP RYQKLQSKGI RSSLNWFLNC SDQRFEERLQ GNFIDPDTEG PTFDMGGKLE MPGGEIVTDE EEDESDDEVL
501: YRRTLTL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80572]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.