CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018756_P001	Maize	plastid	92.69	91.18
TraesCS2A01G255200.1	Wheat	cytosol	60.96	79.27
Os07t0134700-00	Rice	plastid	79.07	78.29
TraesCS2D01G255600.1	Wheat	mitochondrion	77.24	76.86
TraesCS2B01G267000.1	Wheat	mitochondrion	76.25	75.74
VIT_03s0063g02590.t01	Wine grape	cytosol	52.82	55.89
GSMUA_Achr4P23060_001	Banana	mitochondrion	61.46	53.01
KRH24469	Soybean	plastid	52.49	50.64
CDY66820	Canola	plastid	51.66	50.0
CDY13794	Canola	plastid	51.33	49.28
Bra031213.1-P	Field mustard	plastid	51.0	48.96
AT2G21710.1	Thale cress	plastid	50.33	47.27
PGSC0003DMT400001916	Potato	plastid	52.99	46.3
KRH29455	Soybean	mitochondrion	42.69	45.25
Solyc01g109630.2.1	Tomato	mitochondrion	52.82	45.11
OQU85198	Sorghum	mitochondrion, plastid	11.79	25.45
KXG39318	Sorghum	plastid	11.96	23.0
OQU90879	Sorghum	plastid	12.13	22.88
EES14251	Sorghum	cytosol	12.46	22.46
OQU77962	Sorghum	plastid	15.78	19.08
EES07645	Sorghum	mitochondrion	14.29	17.59
KXG30576	Sorghum	cytosol	13.46	16.46
EER97446	Sorghum	mitochondrion	13.79	16.4
OQU89932	Sorghum	plastid	14.62	14.45

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	EntrezGene:8086386	UniProt:A0A1W0W215	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003690	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009506	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	InterPro:IPR038538	InterPro:MTERF
InterPro:MTERF_sf	EnsemblPlants:OQU88410	ProteinID:OQU88410	ProteinID:OQU88410.1	PFAM:PF02536	PANTHER:PTHR13068
PANTHER:PTHR13068:SF4	SMART:SM00733	EnsemblPlantsGene:SORBI_3002G028400	UniParc:UPI0001A82E93	RefSeq:XP_002459325.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:2601814..2605391

Molecular Weight (calculated)

67812.1 Da

IEP (calculated)

9.892

GRAVY (calculated)

-0.088

Length

602 amino acids

Sequence
(BLAST)

001: MAAALPHSHL RLPLHTPSPT SRRRPRLRLP SVVAVSRLQN PTTTTHPVLP PPAPPPSAAL LAAEGASLAP RREPRFPGSV SSPTSSASAG LSEAEDAVVR
101: RALQVRRAVA AEALVAALGG GKVGGLTYVK NLMSRMGPFV DRVVVEAAAM RRDRPDLAHM SFNARAKAYI LESGLVELVK WFKHNSMTYP QIAKVVCACS
201: GDLGKVRRMI KWLRSIYVKG DFLGRVLANG GSFLNRSFEE LEEIIGYLES HGVRRDWIGY VVSRCPQLLS LPMDELETRV RFYTDLGMDE KDFGTMVYDY
301: PRVLGFLSLE EMNSKVQYLK EFGLSTEELG RLLAFKPQLM ACSIEERWKP LVKYLYHLNI TRDGMKRMLM VQPTIFCLDL ETVIVPKVQF LMDIGVRSDA
401: IGNVLVKFPP VLTYSLYKKI RPVVIFLLTK GGVKQDDIGK VIALDPQLLG CSIAHKLEVS VKYFRSLGIY HFVLGQMIAD FPTLLRYNVD ILRPKYQYLR
501: RVMVRPLKDL IEFPRFFSYS LEDRIEPRHQ TLVANRINMK LRYMLTGSDE EFAQRVREAV ERRARFEARK ACPETFSGSS ETSRETEGTV APACQDSIDV
601: VD

Best Arabidopsis Sequence Match ( AT2G21710.1 )
(BLAST)

001: MLLHCNVSYY TSTFSFISSS LRRQDNADDS QDTVIRRRHN ARSISLYIRH NRDLKLNKNP NESQETFVPP PPPPRRDLDG ENRSKLLELS LVTRRTPQFP
101: GSIYAQSASD ADIASSLPSL RNFLGSDGDD DGESEREMIV KALEIRRKVT KEIIKESLVR KGRFGITYAT NVTDRLGDFV DHVMIQAAAL KRLPEFSESR
201: FNLRARTVIE DSNFVPLVRW LKHHELSYNR IAKIICMSKG NLDSIRIMIE WLKSIHVKGE FIAVAFLRSG DNILQRNREE LNEIVEYLES NGVRRDWMGY
301: VVGRCPELLS FSMEEVKSRV DFFLKMGMNQ NDFGTMVYDY PKIIGFFSFQ VMEKKINYLK EFGLSTEEVG RLLAYKPHLM GCSIEERWKP LVKYFYYLGI
401: PKEGMKRILV VKPILYCIDL EKTIAPKVRF LQEMGIPNEA IGNMLVKFPS LLTNSLYKKI RPVVIFLLTR AGVTQKDIGK VIAMDPALLG CSIGTKLEPN
501: MRYYISLGIR FYQLGEMIAD FPMLLRYNVD NLRPKYRYLR RTMIRPLQDL IEFPRFFSYS LERRIIPRHT IMVENRVNFK LRYMLACTDE EFERRVRDKV
601: ERRERFEAGL DSEDSQPSDE NISDQEIAFS DEAEEEEDLT E

Arabidopsis Description

MTERF2Transcription termination factor MTERF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IHL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.