Factsheet for TraesCS2A01G255200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G255600.1	Wheat	mitochondrion	95.46	73.06
TraesCS2B01G267000.1	Wheat	mitochondrion	94.17	71.95
OQU88410	Sorghum	plastid	79.27	60.96
Os07t0134700-00	Rice	plastid	79.48	60.53
Zm00001d018756_P001	Maize	plastid	79.91	60.46
VIT_03s0063g02590.t01	Wine grape	cytosol	61.12	49.74
GSMUA_Achr4P23060_001	Banana	mitochondrion	65.23	43.27
KRH24469	Soybean	plastid	58.1	43.11
CDY66820	Canola	plastid	56.37	41.96
CDY13794	Canola	plastid	56.8	41.95
AT2G21710.1	Thale cress	plastid	57.02	41.19
Bra031213.1-P	Field mustard	plastid	55.72	41.15
PGSC0003DMT400001916	Potato	plastid	57.24	38.46
Solyc01g109630.2.1	Tomato	mitochondrion	57.45	37.73
KRH29455	Soybean	mitochondrion	45.57	37.15
TraesCS5A01G423600.1	Wheat	plastid	16.63	24.06
TraesCS6A01G201500.1	Wheat	extracellular, mitochondrion, plastid	12.96	21.43
TraesCS1A01G084300.1	Wheat	mitochondrion	14.47	21.34
TraesCS1A01G252300.1	Wheat	cytosol	18.14	21.21
TraesCS2A01G284000.1	Wheat	cytosol	6.05	20.74
TraesCS7A01G250000.3	Wheat	cytosol	14.9	20.72
TraesCS2A01G189200.1	Wheat	plastid	17.28	16.03
TraesCS6A01G214200.1	Wheat	plastid	15.77	15.08
TraesCS6A01G343900.1	Wheat	plastid	17.06	14.63
TraesCS5A01G363600.1	Wheat	plastid	15.55	12.59

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009506	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536
PANTHER:PTHR13068	PANTHER:PTHR13068:SF4	SMART:SM00733	EnsemblPlantsGene:TraesCS2A01G255200	EnsemblPlants:TraesCS2A01G255200.1	:

Description

No Description!

Coordinates

chr2A:-:389439256..389442834

Molecular Weight (calculated)

53443.3 Da

IEP (calculated)

8.746

GRAVY (calculated)

-0.196

Length

463 amino acids

Sequence
(BLAST)

001: MRRDRPELAH QSFNARARTY IQESGVVELV KWFKHNSLTY PQIAKVVCSC SGDLEKVRRM LKWLRSIYVK GEFLGRVLAK GESLMSRSFE ELEEITGYLE
101: CCGVRRDWIG HVVSRCPQLL NLSLDELETR VQFYTDMGMN ENDFGTMVYD YPKVLGFFSL EEMNSKVQYL KEFGLSTEEL GKMLAYKPQL MACSIEERWK
201: PLVKYLYHLN ISRDGMKRML VVQPTIFCLD LETVIAPKVR FLQDIGVRND AVGNVLVKFP PVLTYSLYRK LRPVVIFLRT KAGVTEDDIG KVIALDPQLM
301: GCSIVHKLEA SVKYFRTLGI YHLVLGQMVA DFPTLLRYNV DVLRSKYQYL RRVMVRPLKD LIEFPRFFSY SLEHRIEPRH KVLVANRINM RLRYMLPGSD
401: EEFAQRVQEA VERRARFEAG EATPETSGAP ETPSSNGNGV AAVACQEMEA VPCKKQEFHV PDL

Best Arabidopsis Sequence Match ( AT2G21710.1 )
(BLAST)

001: MLLHCNVSYY TSTFSFISSS LRRQDNADDS QDTVIRRRHN ARSISLYIRH NRDLKLNKNP NESQETFVPP PPPPRRDLDG ENRSKLLELS LVTRRTPQFP
101: GSIYAQSASD ADIASSLPSL RNFLGSDGDD DGESEREMIV KALEIRRKVT KEIIKESLVR KGRFGITYAT NVTDRLGDFV DHVMIQAAAL KRLPEFSESR
201: FNLRARTVIE DSNFVPLVRW LKHHELSYNR IAKIICMSKG NLDSIRIMIE WLKSIHVKGE FIAVAFLRSG DNILQRNREE LNEIVEYLES NGVRRDWMGY
301: VVGRCPELLS FSMEEVKSRV DFFLKMGMNQ NDFGTMVYDY PKIIGFFSFQ VMEKKINYLK EFGLSTEEVG RLLAYKPHLM GCSIEERWKP LVKYFYYLGI
401: PKEGMKRILV VKPILYCIDL EKTIAPKVRF LQEMGIPNEA IGNMLVKFPS LLTNSLYKKI RPVVIFLLTR AGVTQKDIGK VIAMDPALLG CSIGTKLEPN
501: MRYYISLGIR FYQLGEMIAD FPMLLRYNVD NLRPKYRYLR RTMIRPLQDL IEFPRFFSYS LERRIIPRHT IMVENRVNFK LRYMLACTDE EFERRVRDKV
601: ERRERFEAGL DSEDSQPSDE NISDQEIAFS DEAEEEEDLT E

Arabidopsis Description

MTERF2Transcription termination factor MTERF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IHL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.