Factsheet for TraesCS2A01G284000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G252300.1	Wheat	cytosol	80.74	27.53
GSMUA_Achr3P24870_001	Banana	cytosol, mitochondrion, plastid	57.04	19.74
PGSC0003DMT400007420	Potato	mitochondrion	60.74	17.19
CDY21931	Canola	golgi, mitochondrion, plastid	61.48	15.69
KRH72610	Soybean	plastid	60.0	15.64
Bra036228.1-P	Field mustard	golgi, mitochondrion, plastid	61.48	15.63
CDY22091	Canola	golgi, mitochondrion, plastid	61.48	15.63
VIT_07s0104g00720.t01	Wine grape	mitochondrion	60.0	15.43
Solyc04g005630.2.1	Tomato	nucleus	60.74	15.19
AT4G02990.1	Thale cress	plastid	60.74	15.16
TraesCS6A01G343900.1	Wheat	plastid	47.41	11.85
TraesCS5A01G423600.1	Wheat	plastid	16.3	6.88
TraesCS2A01G255200.1	Wheat	cytosol	20.74	6.05
TraesCS7A01G250000.3	Wheat	cytosol	14.07	5.71
TraesCS1A01G084300.1	Wheat	mitochondrion	11.85	5.1
TraesCS2A01G189200.1	Wheat	plastid	16.3	4.41
TraesCS6A01G201500.1	Wheat	extracellular, mitochondrion, plastid	8.89	4.29
TraesCS5A01G363600.1	Wheat	plastid	17.04	4.02
TraesCS6A01G214200.1	Wheat	plastid	12.59	3.51

Protein Annotations

EnsemblPlants:TraesCS2A01G284000.1	EnsemblPlantsGene:TraesCS2A01G284000	Gene3D:1.25.70.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003690	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PANTHER:PTHR13068
PANTHER:PTHR13068:SF8	PFAM:PF02536	SMART:SM00733	MapMan:15.6.2.2	:	:

Description

No Description!

Coordinates

chr2A:-:476213832..476214239

Molecular Weight (calculated)

14871.3 Da

IEP (calculated)

9.199

GRAVY (calculated)

-0.005

Length

135 amino acids

Sequence
(BLAST)

001: MRERVKFLRS LGLGPDDLAA YPLALGSSVR KNMVPVLDYL GKIGVRRDEL PHLLRRYPQV LHAGIVVDLA PVVKYLQGVD VKPDDVPRVL ERYPELLGFK
101: LEGTCPVPVH SCGTRGSHAL SHACSTTLMQ NSMSV

Best Arabidopsis Sequence Match ( AT4G02990.1 )
(BLAST)

001: MKIRFCNGFT KPGFLLVHFE PPSFFAVRSR SLSDSTYGNL CNHKKRPGTG IGLTVQCAIA NRRFSSRSLD SPRRERSSRS SSSSGRDRDR DKDKGRDSKS
101: LYSRPSLLDM NKEKAANRAK VYEFLRGIGI VPDELDGLEL PVTADVMKER VEFLHKLGLT IEDINNYPLV LGCSVKKNMV PVLDYLGKLG VRKSTFTEFL
201: RRYPQVLHSS VVIDLAPVVK YLQGLDIKPS DVPRVLERYP EVLGFKLEGT MSTSVAYLVG IGVARREIGG ILTRYPEILG MRVARIIKPL VEYLEVLGIP
301: RLAAARLIEK RPHILGFELD DTVKPNVQIL QDFNVRETSL PSIIAQYPEI IGIDLKPKLD TQRKLLCSAI HLNPEDLGSL IERMPQFVSL SESPMLKHID
401: FLTKCGFSID QTREMVIGCP QVLALNLGIM KLSFEYFQKE MKRPLQDLVD FPAFFTYGLE STVKPRHKKI IKKGIKCSLA WMLNCSDEKF EQRMSYDTID
501: IEEVETDPSS FDMNTLMQPE REEESDSEYE EEEDDDDEEF A

Arabidopsis Description

MTERF4Transcription termination factor MTERF4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT96]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.