Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- mitochondrion 3
- cytosol 1
- endoplasmic reticulum 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21931 | Canola | golgi, mitochondrion, plastid | 79.67 | 81.47 |
| Bra036228.1-P | Field mustard | golgi, mitochondrion, plastid | 79.67 | 81.17 |
| CDY22091 | Canola | golgi, mitochondrion, plastid | 79.67 | 81.17 |
| PGSC0003DMT400007420 | Potato | mitochondrion | 62.85 | 71.28 |
| VIT_07s0104g00720.t01 | Wine grape | mitochondrion | 67.28 | 69.33 |
| KRH72610 | Soybean | plastid | 65.25 | 68.15 |
| Solyc04g005630.2.1 | Tomato | nucleus | 65.25 | 65.37 |
| TraesCS2A01G284000.1 | Wheat | cytosol | 15.16 | 60.74 |
| TraesCS1A01G252300.1 | Wheat | cytosol | 44.18 | 60.35 |
| TraesCS1B01G265700.1 | Wheat | cytosol | 48.24 | 60.28 |
| GSMUA_Achr3P24870_001 | Banana | cytosol, mitochondrion, plastid | 42.14 | 58.46 |
| Os05t0404000-01 | Rice | plastid | 54.34 | 57.87 |
| OQU77962 | Sorghum | plastid | 52.5 | 57.03 |
| Zm00001d010340_P001 | Maize | plastid | 51.76 | 56.68 |
| TraesCS1D01G252000.1 | Wheat | plastid | 51.76 | 56.0 |
| HORVU1Hr1G061210.8 | Barley | plastid | 51.39 | 55.94 |
| AT2G44020.1 | Thale cress | mitochondrion | 40.85 | 43.59 |
| AT2G34620.1 | Thale cress | plastid | 13.68 | 24.42 |
| AT3G18870.1 | Thale cress | plastid | 11.28 | 22.26 |
| AT4G38160.3 | Thale cress | cytosol, nucleus, peroxisome | 14.42 | 20.63 |
| AT2G03050.2 | Thale cress | cytosol, golgi, mitochondrion, plastid | 10.72 | 20.42 |
| AT2G36000.1 | Thale cress | plastid | 11.28 | 18.32 |
| AT4G14605.2 | Thale cress | cytosol | 15.53 | 17.04 |
| AT5G55580.1 | Thale cress | plastid | 15.53 | 16.94 |
| AT2G21710.1 | Thale cress | plastid | 19.04 | 16.07 |
| AT1G78930.1 | Thale cress | plastid | 17.19 | 15.74 |
| AT5G54180.1 | Thale cress | plastid | 13.68 | 14.8 |
Protein Annotations
| Gene3D:1.25.70.10 | MapMan:15.6.2.2 | MapMan:16.12.2.1.1.6 | EntrezGene:828116 | ProteinID:AAC79107.1 | ProteinID:AEE82257.1 |
| EMBL:AF378901 | ProteinID:ANM67864.1 | ArrayExpress:AT4G02990 | EnsemblPlantsGene:AT4G02990 | RefSeq:AT4G02990 | TAIR:AT4G02990 |
| RefSeq:AT4G02990-TAIR-G | EnsemblPlants:AT4G02990.1 | TAIR:AT4G02990.1 | EMBL:AY052742 | Unigene:At.10877 | EMBL:BX827924 |
| ProteinID:CAB77784.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003690 |
| GO:GO:0003723 | GO:GO:0003727 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006353 | GO:GO:0006355 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008380 | GO:GO:0009058 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009658 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0019843 | GO:GO:0032502 | GO:GO:0042255 | GO:GO:0042793 | GO:GO:0042794 |
| InterPro:IPR038538 | InterPro:MTERF | InterPro:MTERF_sf | RefSeq:NP_001329662.1 | RefSeq:NP_192208.1 | PFAM:PF02536 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR13068 | PANTHER:PTHR13068:SF24 | UniProt:Q9ZT96 | SMART:SM00733 | UniParc:UPI00000A10DD | SEG:seg |
Description
MTERF4Transcription termination factor MTERF4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT96]
Coordinates
chr4:+:1321758..1324062
Molecular Weight (calculated)
61552.6 Da
IEP (calculated)
6.720
GRAVY (calculated)
-0.313
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIRFCNGFT KPGFLLVHFE PPSFFAVRSR SLSDSTYGNL CNHKKRPGTG IGLTVQCAIA NRRFSSRSLD SPRRERSSRS SSSSGRDRDR DKDKGRDSKS
101: LYSRPSLLDM NKEKAANRAK VYEFLRGIGI VPDELDGLEL PVTADVMKER VEFLHKLGLT IEDINNYPLV LGCSVKKNMV PVLDYLGKLG VRKSTFTEFL
201: RRYPQVLHSS VVIDLAPVVK YLQGLDIKPS DVPRVLERYP EVLGFKLEGT MSTSVAYLVG IGVARREIGG ILTRYPEILG MRVARIIKPL VEYLEVLGIP
301: RLAAARLIEK RPHILGFELD DTVKPNVQIL QDFNVRETSL PSIIAQYPEI IGIDLKPKLD TQRKLLCSAI HLNPEDLGSL IERMPQFVSL SESPMLKHID
401: FLTKCGFSID QTREMVIGCP QVLALNLGIM KLSFEYFQKE MKRPLQDLVD FPAFFTYGLE STVKPRHKKI IKKGIKCSLA WMLNCSDEKF EQRMSYDTID
501: IEEVETDPSS FDMNTLMQPE REEESDSEYE EEEDDDDEEF A
101: LYSRPSLLDM NKEKAANRAK VYEFLRGIGI VPDELDGLEL PVTADVMKER VEFLHKLGLT IEDINNYPLV LGCSVKKNMV PVLDYLGKLG VRKSTFTEFL
201: RRYPQVLHSS VVIDLAPVVK YLQGLDIKPS DVPRVLERYP EVLGFKLEGT MSTSVAYLVG IGVARREIGG ILTRYPEILG MRVARIIKPL VEYLEVLGIP
301: RLAAARLIEK RPHILGFELD DTVKPNVQIL QDFNVRETSL PSIIAQYPEI IGIDLKPKLD TQRKLLCSAI HLNPEDLGSL IERMPQFVSL SESPMLKHID
401: FLTKCGFSID QTREMVIGCP QVLALNLGIM KLSFEYFQKE MKRPLQDLVD FPAFFTYGLE STVKPRHKKI IKKGIKCSLA WMLNCSDEKF EQRMSYDTID
501: IEEVETDPSS FDMNTLMQPE REEESDSEYE EEEDDDDEEF A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.