Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- plasma membrane 1
- mitochondrion 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45184 | Canola | extracellular, mitochondrion | 90.14 | 89.82 |
| CDY03022 | Canola | extracellular | 89.79 | 89.79 |
| Bra024793.1-P | Field mustard | extracellular | 89.79 | 89.79 |
| PGSC0003DMT400047490 | Potato | mitochondrion | 22.54 | 68.09 |
| KRH74890 | Soybean | cytosol, plasma membrane, plastid | 53.87 | 57.74 |
| KRH70749 | Soybean | plastid | 54.58 | 52.54 |
| VIT_01s0010g03740.t01 | Wine grape | plastid | 57.39 | 52.08 |
| PGSC0003DMT400047424 | Potato | plastid | 55.28 | 49.37 |
| Solyc05g007840.2.1 | Tomato | plastid | 54.58 | 47.26 |
| GSMUA_Achr5P23270_001 | Banana | mitochondrion | 50.7 | 46.6 |
| GSMUA_Achr6P02570_001 | Banana | plastid | 36.27 | 42.74 |
| AT2G34620.1 | Thale cress | plastid | 41.2 | 38.61 |
| AT3G18870.1 | Thale cress | plastid | 30.63 | 31.75 |
| AT2G36000.1 | Thale cress | plastid | 36.62 | 31.23 |
| AT4G38160.3 | Thale cress | cytosol, nucleus, peroxisome | 23.59 | 17.72 |
| AT4G14605.2 | Thale cress | cytosol | 24.3 | 14.0 |
| AT5G55580.1 | Thale cress | plastid | 24.3 | 13.91 |
| AT5G54180.1 | Thale cress | plastid | 22.89 | 13.0 |
| AT2G44020.1 | Thale cress | mitochondrion | 22.54 | 12.62 |
| AT1G78930.1 | Thale cress | plastid | 24.65 | 11.84 |
| AT2G21710.1 | Thale cress | plastid | 26.41 | 11.7 |
| AT4G02990.1 | Thale cress | plastid | 20.42 | 10.72 |
Protein Annotations
| Gene3D:1.25.70.10 | MapMan:15.6.2.2 | EntrezGene:814834 | UniProt:A0A178VYV9 | ProteinID:AAC32923.1 | ProteinID:AAT69165.1 |
| ProteinID:AEC05659.1 | ProteinID:ANM62290.1 | ArrayExpress:AT2G03050 | EnsemblPlantsGene:AT2G03050 | RefSeq:AT2G03050 | TAIR:AT2G03050 |
| RefSeq:AT2G03050-TAIR-G | EnsemblPlants:AT2G03050.2 | EMBL:AY219044 | Unigene:At.41435 | Symbol:EMB93 | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003690 | GO:GO:0003723 | GO:GO:0003727 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006353 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008380 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009658 | GO:GO:0009790 |
| GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019843 | GO:GO:0042255 |
| InterPro:IPR038538 | InterPro:MTERF | InterPro:MTERF_sf | RefSeq:NP_001324457.1 | RefSeq:NP_178405.2 | ProteinID:OAP11024.1 |
| PFAM:PF02536 | PANTHER:PTHR13068 | PANTHER:PTHR13068:SF36 | UniProt:Q84X53 | SMART:SM00733 | UniParc:UPI00000A7096 |
| SEG:seg | : | : | : | : | : |
Description
MTERF1SOLDAT10 [Source:UniProtKB/TrEMBL;Acc:A0A178VYV9]
Coordinates
chr2:-:899690..900999
Molecular Weight (calculated)
32392.8 Da
IEP (calculated)
9.195
GRAVY (calculated)
-0.039
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MMIARCSLFP PPCFSAVRIR CFAGETSDTG ILFREKLIYL QDLNVDPHKA LRVNPSLRSA PISSVVSVET LLSSTGLSRP AVGRILDMFP DLLTSDPESE
101: ILPVLRFLSN EISISEQDIP KSISRCPRLL ISSVDYQLRP ALTFLKTLGF VGRDTITSRN TVLLVSNVER TLIPKIEYLE EGLGFTREEV AKMVVRSPAL
201: LTYSVDNNLV PKVEFFIEEM RGDVKELKRF PQYFSFSLER KIKPRHRLLK EHGILMPLSE MLKVSDGQFN HWLLELRLRS AERR
101: ILPVLRFLSN EISISEQDIP KSISRCPRLL ISSVDYQLRP ALTFLKTLGF VGRDTITSRN TVLLVSNVER TLIPKIEYLE EGLGFTREEV AKMVVRSPAL
201: LTYSVDNNLV PKVEFFIEEM RGDVKELKRF PQYFSFSLER KIKPRHRLLK EHGILMPLSE MLKVSDGQFN HWLLELRLRS AERR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.