CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024793.1-P	Field mustard	extracellular	99.65	100.0
CDY03022	Canola	extracellular	98.95	99.3
AT2G03050.2	Thale cress	cytosol, golgi, mitochondrion, plastid	89.82	90.14
PGSC0003DMT400047490	Potato	mitochondrion	23.16	70.21
KRH74890	Soybean	cytosol, plasma membrane, plastid	54.04	58.11
KRH70749	Soybean	plastid	54.74	52.88
VIT_01s0010g03740.t01	Wine grape	plastid	57.19	52.08
PGSC0003DMT400047424	Potato	plastid	54.74	49.06
GSMUA_Achr5P23270_001	Banana	mitochondrion	51.93	47.9
Solyc05g007840.2.1	Tomato	plastid	53.68	46.65
GSMUA_Achr6P02570_001	Banana	plastid	35.09	41.49
CDX84297	Canola	plastid	40.35	34.85
CDX92284	Canola	plastid	32.98	34.18
CDX99300	Canola	plastid	32.63	33.82
CDY29073	Canola	cytosol, plastid	22.46	19.1
CDX90610	Canola	cytosol	22.11	18.81
CDY29749	Canola	cytosol	27.02	15.71
CDY16267	Canola	cytosol	26.67	15.67
CDY36755	Canola	nucleus, vacuole	24.56	14.2
CDY66686	Canola	extracellular, vacuole	24.56	14.2
CDY14326	Canola	plastid	24.21	13.83
CDY18308	Canola	plastid	24.21	13.83
CDX79786	Canola	mitochondrion	23.86	13.79
CDY17890	Canola	mitochondrion	23.51	13.45
CDY66820	Canola	plastid	24.91	11.41
CDY21931	Canola	golgi, mitochondrion, plastid	21.05	11.34
CDY13794	Canola	plastid	24.56	11.16
CDY22091	Canola	golgi, mitochondrion, plastid	20.0	10.73

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:A0A078I6Z2	UniProt:A0A078I6Z2	EnsemblPlants:CDY45184	ProteinID:CDY45184
ProteinID:CDY45184.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00081608001	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068
PANTHER:PTHR13068:SF36	SMART:SM00733	UniParc:UPI0004EEF1C5	SEG:seg	:	:

Description

BnaA06g33880DBnaA06g33880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6Z2]

Coordinates

chrLK032617:+:101640..102720

Molecular Weight (calculated)

32459.0 Da

IEP (calculated)

8.626

GRAVY (calculated)

0.038

Length

285 amino acids

Sequence
(BLAST)

001: MMFARCCLLP PPFISAVRTR CFAGETSDTG LLFREKLIYL QDLNVDPHKA LRVNPSLRAA PISTVVSVET LLSSTGLSRP AVGRILDMFP DLLTSDPESD
101: ILPVLRFLSD EIYLSDEDIP KSITRCPRLL ISSVDFQLRP ALAFLKTLGF VGRDTVTSRN TVLLVSSVER TLIPKIEFLE EGLGFTRDEV AKMVVRSPAL
201: LTYSVENNLA PKVEFFMEEM RGDVKELKRF PQYFSFSLER KIKPRHRLLK EHGILMPLSE MLKVSDGQFN LWLVELRLRS VERRL

Best Arabidopsis Sequence Match ( AT2G03050.2 )
(BLAST)

001: MMIARCSLFP PPCFSAVRIR CFAGETSDTG ILFREKLIYL QDLNVDPHKA LRVNPSLRSA PISSVVSVET LLSSTGLSRP AVGRILDMFP DLLTSDPESE
101: ILPVLRFLSN EISISEQDIP KSISRCPRLL ISSVDYQLRP ALTFLKTLGF VGRDTITSRN TVLLVSNVER TLIPKIEYLE EGLGFTREEV AKMVVRSPAL
201: LTYSVDNNLV PKVEFFIEEM RGDVKELKRF PQYFSFSLER KIKPRHRLLK EHGILMPLSE MLKVSDGQFN HWLLELRLRS AERR

Arabidopsis Description

MTERF1SOLDAT10 [Source:UniProtKB/TrEMBL;Acc:A0A178VYV9]
SUBAcon: [mitochondrion,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.