CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004800.1-P	Field mustard	cytosol	90.47	99.78
CDY17890	Canola	mitochondrion	96.35	95.38
AT2G44020.1	Thale cress	mitochondrion	87.02	84.62
VIT_11s0016g02240.t01	Wine grape	mitochondrion	73.23	75.05
KRH60420	Soybean	cytosol	61.46	74.26
KRH41721	Soybean	mitochondrion	73.23	72.34
PGSC0003DMT400023814	Potato	mitochondrion	69.78	69.92
Solyc11g017050.1.1	Tomato	extracellular	70.39	69.68
Os02t0783100-01	Rice	mitochondrion	61.87	62.89
EES07645	Sorghum	mitochondrion	62.07	62.58
Zm00001d052081_P003	Maize	mitochondrion	61.66	62.17
TraesCS6D01G325000.1	Wheat	mitochondrion	60.65	60.9
TraesCS6B01G376100.1	Wheat	mitochondrion	60.24	60.49
GSMUA_Achr10P...	Banana	mitochondrion	44.42	59.03
HORVU6Hr1G082970.1	Barley	cytosol	60.45	56.55
TraesCS6A01G343900.1	Wheat	plastid	60.85	55.56
CDY21931	Canola	golgi, mitochondrion, plastid	44.22	41.21
CDY22091	Canola	golgi, mitochondrion, plastid	43.81	40.68
CDY03022	Canola	extracellular	13.79	23.94
CDY45184	Canola	extracellular, mitochondrion	13.79	23.86
CDY29073	Canola	cytosol, plastid	15.82	23.28
CDX90610	Canola	cytosol	15.62	22.99
CDX92284	Canola	plastid	12.78	22.91
CDX99300	Canola	plastid	12.58	22.55
CDX84297	Canola	plastid	13.79	20.61
CDY29749	Canola	cytosol	15.82	15.92
CDY16267	Canola	cytosol	15.42	15.67
CDY36755	Canola	nucleus, vacuole	15.42	15.42
CDY13794	Canola	plastid	19.47	15.31
CDY66686	Canola	extracellular, vacuole	15.21	15.21
CDY66820	Canola	plastid	19.07	15.11
CDY18308	Canola	plastid	15.01	14.83
CDY14326	Canola	plastid	14.81	14.63

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	MapMan:16.12.2.2.1.5	GO:A0A078CRK1	EnsemblPlants:CDX79786	ProteinID:CDX79786
ProteinID:CDX79786.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00132614001	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068
PANTHER:PTHR13068:SF8	SMART:SM00733	UniParc:UPI0004EF4CDF	SEG:seg	:	:

Description

BnaA05g03700D

Coordinates

chrLK031819:+:160716..162197

Molecular Weight (calculated)

56215.4 Da

IEP (calculated)

8.089

GRAVY (calculated)

-0.089

Length

493 amino acids

Sequence
(BLAST)

001: MTHLLPRHKK LLSFLTRHHP ILKTLLQNPP PISHYATQSS KFPEYEMPTV TWGVIQGKKE KLVNRVKVCD HLQTLGVITD ELETIELPST LEVISERLEF
101: LHKLGLTIDD VNEYPLMLGC SVRKNLIPVL AYLEKIGISR SKLGEFVKNY PQVLHASVVV ELAPVVKFLR GLDVEKQDLG YVLMKYPELL GFKLEGTMST
201: SVAYLVSIGV SPRDIGPMVT QYPYLLGMRV GTMIKPLVDY LISIGLPKKI VARMLEKRAY VIGYSLEETV KPNVECLISF GVRREMLPLV IAQYPQILGL
301: PVKAKMSTQQ YFFSLKLKVD PEGFARVVEK MPQVVSLKQN VIMKPVEFLL GRGFRVEDVA RMVVRCPQIL CSRVELMKNG YYFYKTEMGR PMKELVEYPE
401: YFTYGLESRI KPRYQKLQGK GIRSSLNWFL NCSDQRFEER LEGNFIDVDS EGPVFEMGGK LDMPGGVGGE VVSDEDDDES DDDEVLYRRT LTL

Best Arabidopsis Sequence Match ( AT2G44020.1 )
(BLAST)

001: MSYLLRRNKF VALLKRQSLI FPITSTEAKT LINPDPNIPQ FQNPCSIFRI AHYATQSSKF PEYEMPTVTW GVIQGKKEKL VNRVKICDYL KGLGIITDEL
101: ESIELPSTIE VMCERVEFLQ KLGLTIDDIN EYPLMLGCSV RKNLIPVLAY LEKIGISRSK LGEFVKNYPQ VLHASVVVEL APVVKFLRGL DVEKQDLGYV
201: LMKYPELLGF KLEGTMSTSV AYLVSIGVSP RDIGPMVTQY PYLLGMRVGT MIKPLVDYLI SIGLPKKIVA RMLEKRSYIV GYNLEETVKP NVDCLISFGV
301: KKELLPLLIA QYPQILGLPV KAKMSTQQYF FSLKLKIDPE GFARVVEKMP QIVSLKQNVI MKPIEFLLGR AFQVEDIAKM VVRCPQILCS RVELMKNSYY
401: FYKTEMGRPM KELVEYPEYF TYSLESRIKP RYQKLQSKGI RSSLNWFLNC SDQRFEERLQ GNFIDPDTEG PTFDMGGKLE MPGGEIVTDE EEDESDDEVL
501: YRRTLTL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80572]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.