CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 3
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14326	Canola	plastid	98.6	98.6
AT5G54180.1	Thale cress	plastid	87.37	87.2
PGSC0003DMT400001588	Potato	plastid	51.7	49.81
Solyc03g081300.2.1	Tomato	plastid	47.7	48.37
KRH64303	Soybean	nucleus	46.09	46.18
CDY03022	Canola	extracellular	13.83	24.3
CDY45184	Canola	extracellular, mitochondrion	13.83	24.21
CDX99300	Canola	plastid	12.22	22.18
CDX92284	Canola	plastid	12.02	21.82
CDY29073	Canola	cytosol, plastid	14.23	21.19
CDX90610	Canola	cytosol	14.03	20.9
CDX84297	Canola	plastid	13.23	20.0
CDY16267	Canola	cytosol	18.84	19.38
CDY29749	Canola	cytosol	18.84	19.18
CDY36755	Canola	nucleus, vacuole	14.83	15.01
CDY66686	Canola	extracellular, vacuole	14.83	15.01
CDX79786	Canola	mitochondrion	14.83	15.01
CDY17890	Canola	mitochondrion	14.63	14.66
VIT_16s0098g00970.t01	Wine grape	plastid	53.71	13.28
CDY22091	Canola	golgi, mitochondrion, plastid	13.83	12.99
CDY21931	Canola	golgi, mitochondrion, plastid	13.63	12.85
CDY66820	Canola	plastid	15.63	12.54
CDY13794	Canola	plastid	15.43	12.28

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.1.2.3.5	MapMan:15.6.2.2	GO:A0A078G110	UniProt:A0A078G110	EnsemblPlants:CDY18308
ProteinID:CDY18308	ProteinID:CDY18308.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00002876001	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536
PANTHER:PTHR13068	PANTHER:PTHR13068:SF32	SMART:SM00733	UniParc:UPI0004EE469F	SEG:seg	:

Description

BnaC09g30580DBnaC09g30580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G110]

Coordinates

chrLK032084:+:252953..254798

Molecular Weight (calculated)

56441.0 Da

IEP (calculated)

7.815

GRAVY (calculated)

0.037

Length

499 amino acids

Sequence
(BLAST)

001: MVILSLVSCS VSLFSPPISL RLHFPPATSL FSHGSFPAST FKPELRPLFV CCLQRRETAH IHRCNCLTCT IDGETQIESL FSLFRDIGFK EEETEMILAK
101: NPDVKSTPLD KISARVASLQ SLKLDGFALQ GLIAKCPSLL TSEELDLVIT FLVGELEGRL DPELVERILA VSDTSFLLSF NQKVRLLIHH GIPKEKISYV
201: LSKVYLNKLM YQKSVEDIER LISYLEPFGG IGIIARRPVI LNSDLDTQLI PRVEFIRNLS GEDDFATGTV LRRLPAILSY SVDHMNSHVE FLKSFAGLTS
301: EQVFKIVHVF PNVISTSKER KLRPRIEFLK QSGFDSPGMF KFLSKAPLFL ALSEDNLSHK LGFLVKIGYK HRTRELAFAM GAVTRTSSDN MQRVIGLYLS
401: YGLSLEDILA MSTKHPQVLQ YSLTSLEEKL EYLIEYMGRE VEELLAFPAF LGYKLDSRIK HRYEEKLKSR GENMSLNKLL TVSAERFSKT ADNIEVICL

Best Arabidopsis Sequence Match ( AT5G54180.1 )
(BLAST)

001: MVILSLVSCS FSVFSPPISL RLHLPPVTSL CSHGTFPASS TFRSQLQPLL ISCLNHREPA LTFRCSCLSS PIESGSQIES LFSLFRDIGF IEEETEMILA
101: KNPDIKSTSL DKIGARVASL QSLKINGFPL QGLIAKCPNL LTSEEFDLVI SFLVDELEGR LDPELVERLL SVVDTSILLS FNQKVRLLLL HGIPKEKISH
201: VLNKVYLNKL LYQKSVEDIE RLISFLEPFG GIGIIARRPV ILNSDLDSQL IPRVDFIRNL SGEDDFATGT VLRRLPAILS YSVEHMNGQV EFLKSFAGLT
301: SEQVFKIVHV FPNVISTSKE RKLRPRIEFL KECGFDSPGM FKFLSKAPLI LALSENNLSH KLGFLVKIGY KHRTKELAFA MGAVTRTSSD NMQRVIGLYL
401: SYGLSFEDIL AMSTKHPQVL QYNYTSLEEK LEYLIEYMGR EVEELLAFPA FLGYKLDSRI KHRYEEKLKS RGENMSLNKL LTVSAERFSK AADNIEMICL

Arabidopsis Description

MTERF8PTAC15 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Y7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.